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TRANSCRIPT CARD

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  1. Transcript 'Boschl.CG.Botznik201...'

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chr7.g16661.01.t

Possible name(s)

A2M; CD109; PZP

Location

chr7 [12,729,589 / 12,734,827]

Sequences

Amino acid sequence

Length: 269

>Boschl.CG.Botznik2013.chr7.g16661.01.p
MIYPAYVHCASAFNVGGFRNVDIGAAFEFCIVFDVPVIDFPMEFTRRVIGVDYYYYDGEE
VAFRGGPPIRAMAMEVMEEDSAVDLADSGGVSQGTATPARSYFPESWIWSESAVRDDGSV
TFNYNTPDTITTWELSSFAVSNTKGLGVTASNSKITVFRSFFLSLTLPPSIVRGEILNMK
TTLFNYFDTDIDATLTLNENEWYDLVIPSGAAIDVAGSTRLVRIPSKDSVTIVFPIKFKK
VGNARISLRALTPLAGDAVERVLLVKVRN

Nucleotide sequence

Length: 810

>Boschl.CG.Botznik2013.chr7.g16661.01.t
TGATTTACCCCGCATATGTGCATTGTGCAAGTGCATTCAACGTCGGTGGTTTTCGTAATG
TTGATATTGGAGCAGCTTTCGAATTCTGCATTGTTTTTGATGTTCCTGTAATAGACTTTC
CCATGGAATTTACACGTCGTGTTATTGGTGGTGATTACTATTACTACGACGGCGAAGAGG
TTGCATTTCGAGGTGGCCCACCAATAAGGGCAATGGCAATGGAGGTGATGGAAGAGGATT
CTGCTGTCGATTTGGCTGATAGTGGCGGTGTCAGTCAAGGAACTGCGACACCTGCTAGAA
GTTATTTTCCCGAATCGTGGATATGGTCTGAGAGCGCTGTCCGGGATGATGGGTCCGTGA
CTTTCAATTACAATACTCCAGACACCATTACAACTTGGGAACTGAGCAGTTTTGCAGTAT
CGAATACGAAAGGTCTTGGCGTAACTGCGTCCAATTCAAAGGTCACGGTATTCCGAAGTT
TCTTCCTATCTCTTACCTTACCGCCTAGCATCGTGCGTGGCGAAATTCTCAATATGAAGA
CAACTCTTTTCAATTATTTTGATACGGATATCGACGCTACTCTTACCCTGAACGAAAACG
AATGGTACGACTTGGTAATCCCATCGGGTGCTGCGATTGATGTCGCCGGTTCGACTCGAC
TGGTTCGAATCCCGAGCAAAGATTCCGTCACGATCGTTTTCCCGATCAAATTCAAAAAAG
TCGGAAATGCAAGGATATCTCTACGCGCTCTTACGCCACTTGCTGGAGATGCTGTCGAAC
GTGTATTATTAGTAAAGGTAAGAAACTGAA

InterProScan

SMART
Macroglobln_a2 (IPR001599) - T[106-197] 9.6E-31
Pfam
Macroglobln_a2 (IPR001599) - T[106-197] 4.4E-26
Gene3D
Ig-like_fold (IPR013783) - T[161-266] 2.2E-19

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
CD109_HUMAN 32.474 % 122 2.0E-31
A2MG_HUMAN 31.126 % 87.4 2.49E-19
PZP_HUMAN 40.816 % 90.5 1.87E-20