- Transcript 'KH2012:KH.C11.638.v1...' >
- Transcript 'Phmamm.CG.MTP2014.S7...' >
- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chr7.g20942.01.t
Possible name(s)
IGDCC3; MALT1; PSG2
Gene model
Location
chr7 [13,205,054 / 13,207,028]
Amino acid sequence
Length: 657
>Boschl.CG.Botznik2013.chr7.g20942.01.p
MTDLNLNEAAICCDCILRLQPSSLRIAFSQLCEYLNATVWAILCKHFLQIKFLCDGDMEA
ISRASRLHSASQSQEMLLRLEKRKNMTIGMLLRHVRCAFDDSQFKCVVSLFSPLHTKTCA
VYSLTAQYFDPISLQPTPATSANLNHFRQCNSLPAPVRQTQHQGHVHGNSYCPSIAHNSN
VSSNFNSLQLESMNNLSDPFKPYLVITQHPKSVSLPGGDDIMLKCTAESDAPVKYSWKKN
GKLLTGCTGKLLMIPDVRHDDSGVYLCVAKTDTLEVVSDSANVTIDDANASHVAIMQNFE
TPGYFATKKVALLIANEQYKYNPVLSSASNDVLAIARTLRELGFKTMTLVNLKLDEMVTA
VELFCKSLIDGAYCVTYLAGHGFENDGQSFIVPVNAPVNYTMEHCFSIKQMIENIQSARD
LNLAVFLLDVCRKRLKRSDGSVRPMPSYKKSGNFVISYATMEHGMAYEVKGHELGVYASS
LVNHLKKDKRVTRVVELVHSDIYRNSVTNGNQRPEFNSNMFEDRKLTDPLHSPCGQNEEI
LENKKWNLIHVGQKPNLYIFECGVDVVLHKTSPFSNQFLLEAAFESGNTPPLNVFNVCIT
LKGHSNAARQKILIENIQRLSNREVTIEIQLRSSDGNVIDRYEDSIYIPFADWWKQS
Nucleotide sequence
Length: 1,974
>Boschl.CG.Botznik2013.chr7.g20942.01.t
AATGACCGACCTCAACTTGAATGAGGCCGCGATTTGTTGTGATTGTATTCTACGCCTCCA
ACCGTCATCTCTGCGAATCGCCTTCAGCCAATTGTGCGAATATCTCAACGCAACAGTATG
GGCCATCCTCTGCAAGCATTTCCTCCAGATAAAGTTCCTCTGCGATGGCGACATGGAAGC
GATATCCCGAGCTTCGCGGCTACACAGTGCTTCGCAATCGCAAGAAATGTTACTCCGGCT
AGAGAAACGGAAAAATATGACAATCGGGATGTTGTTACGGCATGTGCGATGTGCTTTTGA
TGACTCTCAATTTAAGTGCGTCGTGTCCTTATTCAGTCCGTTGCACACGAAAACGTGCGC
CGTCTATTCCCTGACAGCTCAATATTTCGATCCAATCTCGCTGCAGCCTACACCTGCTAC
TTCTGCAAATTTGAACCATTTTCGACAGTGTAATTCACTACCAGCACCAGTCAGGCAAAC
ACAACATCAGGGTCACGTTCATGGTAATAGCTACTGCCCAAGCATTGCGCACAATAGCAA
CGTGTCTTCAAATTTTAATTCATTACAACTCGAAAGCATGAATAACCTTTCCGACCCTTT
CAAGCCGTATTTGGTGATAACACAACACCCCAAAAGCGTATCTCTTCCGGGAGGTGACGA
TATAATGCTAAAATGCACTGCAGAAAGCGATGCGCCGGTTAAATACTCTTGGAAAAAGAA
TGGCAAATTATTAACCGGCTGTACCGGGAAGCTGTTGATGATACCCGATGTTCGACATGA
TGACAGCGGTGTGTATTTGTGTGTAGCGAAAACGGATACTTTGGAAGTTGTTTCGGACTC
CGCCAATGTGACGATTGATGATGCGAACGCCTCCCATGTTGCAATTATGCAAAATTTTGA
AACGCCGGGGTATTTCGCAACAAAAAAGGTGGCTTTACTTATCGCAAACGAACAATACAA
GTACAACCCAGTATTGTCGTCAGCATCGAATGATGTTCTAGCCATCGCCCGGACTTTGAG
AGAGCTCGGGTTCAAAACAATGACTCTCGTCAATCTGAAATTGGATGAAATGGTGACGGC
GGTGGAGTTGTTTTGCAAAAGTTTGATAGACGGGGCCTACTGTGTAACGTACTTGGCCGG
TCATGGTTTCGAAAATGACGGCCAAAGCTTCATTGTGCCAGTTAATGCCCCTGTGAATTA
CACCATGGAGCATTGTTTTTCAATTAAACAAATGATCGAAAATATCCAGTCAGCACGAGA
CTTGAATCTCGCCGTGTTTTTACTTGACGTGTGTCGGAAGAGATTGAAACGTAGCGACGG
ATCTGTGAGACCGATGCCTTCATACAAGAAATCCGGCAATTTCGTGATCAGTTACGCAAC
AATGGAGCATGGAATGGCGTACGAAGTTAAAGGGCATGAACTTGGCGTTTACGCTTCAAG
TTTAGTGAATCATCTCAAAAAAGACAAACGAGTCACGAGAGTAGTTGAATTGGTACACAG
CGATATCTATAGGAATAGTGTTACGAACGGCAACCAGCGGCCTGAATTTAATTCCAATAT
GTTTGAGGACAGGAAATTAACCGATCCGTTACATTCGCCCTGCGGACAAAACGAAGAAAT
TTTGGAAAACAAAAAGTGGAATCTAATTCACGTTGGCCAGAAACCAAATCTTTATATCTT
CGAATGCGGAGTCGACGTCGTATTGCATAAGACTTCTCCGTTTTCAAATCAGTTCCTGCT
AGAGGCCGCGTTCGAATCTGGCAACACTCCACCTCTCAACGTTTTCAACGTCTGCATAAC
TCTAAAAGGACACAGTAATGCCGCCCGTCAAAAGATATTGATCGAAAACATTCAACGTTT
AAGCAACAGAGAAGTGACCATTGAAATACAGTTGCGATCTTCCGACGGTAATGTCATCGA
TCGTTATGAAGACTCGATTTACATTCCGTTTGCGGATTGGTGGAAACAGTCCTG
| ProSiteProfiles |
Ig-like_dom (IPR007110) - T[202-284] 12.041 |
| Gene3D |
Ig-like_fold (IPR013783) - T[203-290] 4.7E-17 |
| SUPERFAMILY |
Ig-like_dom_sf (IPR036179) - T[203-272] 1.01E-14 |
| SMART |
Ig_sub (IPR003599) - T[210-286] 1.3E-8 |
| SMART |
Ig_sub2 (IPR003598) - T[216-274] 5.9E-6 |
| SUPERFAMILY |
Caspase-like_dom_sf (IPR029030) - T[306-528] 1.06E-30 |
| ProSiteProfiles |
Pept_C14_p20 (IPR001309) - T[307-385] 14.974 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| MALT1_HUMAN | 32.821 % | 191 | 8.91E-52 |