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TRANSCRIPT CARD

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  1. Clone 'cien148961' > 
  2. Transcript 'Boschl.CG.Botznik201...'

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chr7.g21590.01.t

Possible name(s)

LPP; TRIP6; ZYX

Gene model

Boschl.CG.Botznik2013.chr7.g21590

Location

chr7 [13,256,565 / 13,261,179]

Sequences

Amino acid sequence

Length: 142

>Boschl.CG.Botznik2013.chr7.g21590.01.p
MNSLEKCTVCSEVITDRILRATGKPYHAACFKCVVCSKNLDGVPFTVDVTNQIHCVDCFH
KKFAPKCSVCDDPIMPENGQEETVRIVALDRSFHIDCYRCEKCGVELSSKGGEGKGCFPL
DGRILCRDCNTALVQEMSHNIR

Nucleotide sequence

Length: 429

>Boschl.CG.Botznik2013.chr7.g21590.01.t
TGAACTCACTTGAAAAATGTACAGTATGTTCCGAAGTGATCACGGACAGAGTTCTGCGTG
CTACAGGAAAGCCGTATCATGCCGCATGTTTCAAGTGTGTTGTTTGTAGCAAGAATTTGG
ACGGAGTACCGTTCACCGTCGATGTTACGAATCAGATTCATTGTGTTGACTGTTTTCACA
AGAAATTCGCCCCAAAATGCTCCGTGTGTGATGACCCGATCATGCCTGAAAACGGGCAGG
AAGAAACGGTTCGGATCGTGGCGCTGGACCGGAGTTTTCATATCGACTGCTATCGATGCG
AAGAATGCGGCGTAGAGCTGTCGTCGAAGGGTGGCGAAGGAAAAGGATGCTTCCCGTTGG
ACGGCCGCATCTTGTGCCGAGACTGCAACACCGCCCTGGTCCAGGAAATGAGTCACAATA
TCAGATAGA

InterProScan

ProSiteProfiles
Znf_LIM (IPR001781) - T[5-65] 13.266 - T[66-136] 10.752
SMART
Znf_LIM (IPR001781) - T[6-58] 8.3E-17 - T[66-129] 9.4E-16
Pfam
Znf_LIM (IPR001781) - T[7-63] 3.3E-10 - T[67-129] 2.5E-9
ProSitePatterns
Znf_LIM (IPR001781) - T[7-40] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
TRIP6_HUMAN 65.468 % 197 4.8E-62
LPP_HUMAN 62.319 % 194 8.41E-60
ZYX_HUMAN 58.955 % 177 5.8E-54