Login
Help

Submit your Data

  1. Clone 'cidg807m09' > 
  2. Transcript 'KH2012:KH.C14.191.v4...' > 
  3. Clone 'AHC0AAA252YI17' > 
  4. Transcript 'KH2012:KH.C9.317.v2....' > 
  5. Transcript 'Boschl.CG.Botznik201...'

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chr7.g21590.01.t

Possible name(s)

LPP; TRIP6; ZYX

Gene model

Boschl.CG.Botznik2013.chr7.g21590

Location

chr7 [13,256,565 / 13,261,179]

Sequences

Amino acid sequence

Length: 142

>Boschl.CG.Botznik2013.chr7.g21590.01.p
MNSLEKCTVCSEVITDRILRATGKPYHAACFKCVVCSKNLDGVPFTVDVTNQIHCVDCFH
KKFAPKCSVCDDPIMPENGQEETVRIVALDRSFHIDCYRCEKCGVELSSKGGEGKGCFPL
DGRILCRDCNTALVQEMSHNIR

Nucleotide sequence

Length: 429

>Boschl.CG.Botznik2013.chr7.g21590.01.t
TGAACTCACTTGAAAAATGTACAGTATGTTCCGAAGTGATCACGGACAGAGTTCTGCGTG
CTACAGGAAAGCCGTATCATGCCGCATGTTTCAAGTGTGTTGTTTGTAGCAAGAATTTGG
ACGGAGTACCGTTCACCGTCGATGTTACGAATCAGATTCATTGTGTTGACTGTTTTCACA
AGAAATTCGCCCCAAAATGCTCCGTGTGTGATGACCCGATCATGCCTGAAAACGGGCAGG
AAGAAACGGTTCGGATCGTGGCGCTGGACCGGAGTTTTCATATCGACTGCTATCGATGCG
AAGAATGCGGCGTAGAGCTGTCGTCGAAGGGTGGCGAAGGAAAAGGATGCTTCCCGTTGG
ACGGCCGCATCTTGTGCCGAGACTGCAACACCGCCCTGGTCCAGGAAATGAGTCACAATA
TCAGATAGA

InterProScan

ProSiteProfiles
Znf_LIM (IPR001781) - T[5-65] 13.266 - T[66-136] 10.752
SMART
Znf_LIM (IPR001781) - T[6-58] 8.3E-17 - T[66-129] 9.4E-16
Pfam
Znf_LIM (IPR001781) - T[7-63] 3.3E-10 - T[67-129] 2.5E-9
ProSitePatterns
Znf_LIM (IPR001781) - T[7-40] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
TRIP6_HUMAN 65.468 % 197 4.8E-62
LPP_HUMAN 62.319 % 194 8.41E-60
ZYX_HUMAN 58.955 % 177 5.8E-54





By clicking "SEND", you accept the terms of our Privacy Policy.

You may choose to prevent this website from aggregating and analyzing the actions you take here. Doing so will protect your privacy, but will also prevent the owner from learning from your actions and creating a better experience for you and other users.