- Transcript 'KH2012:KH.C3.84.v3.A...' >
- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chr7.g30089.01.t
Possible name(s)
IRF2; IRF5; IRF8
Gene model
Location
chr7 [14,369,962 / 14,371,537]
Amino acid sequence
Length: 524
>Boschl.CG.Botznik2013.chr7.g30089.01.p
MSSTANAPELRSWLERHISSELYKGLRWVRYDEEAKIFILPLVSKYANIPQKEGYYKLFR
DWEASQEHGQKDADVYHLRASFMSMLDKSVDFEEITSDYAIPKEYKYKVFRFVPVCRLSK
DANVSVGMQLNRNGGNTATQKEPTSVSGCNESDHVPIHVDPMAVCGNNGQHRSTQTAVNT
SPARGDELLSPETIAALTIDIGQSGRNQGDSDGIGDVQPPTDHRLPTESHNTELGEVQPI
PPIPQQTSQGASDTSSDSDLAVDEVVVTSKRSDSDKSLDEIMVDTTERQLDKMGVTKEML
GCWRLIIKYNSRTVLESRIPLLQRCYRVCFGNQEFVTRLMKKHDALNKYWDSQHFRILKL
PQLDSYTYPVSDILSLYRMGIAIWYSPEELTVYASRLCQSHVYYYDPHDLRTGPELKKLT
RSERTVVFSYITYLQRYQTKCQVPLEHTCVEDGAITFIVGTKPRSKAALPNMKGLTIELI
PRCVEILRAMAEDFKLCYSRPSSCDAELKRQEEDVDTSTDVASV
Nucleotide sequence
Length: 1,575
>Boschl.CG.Botznik2013.chr7.g30089.01.t
TGTCTTCAACCGCAAACGCGCCTGAATTACGTTCTTGGTTGGAAAGACACATCAGCAGCG
AACTCTACAAGGGTTTGCGGTGGGTGAGGTACGACGAAGAAGCCAAGATATTCATTCTAC
CGCTGGTGTCGAAGTACGCAAACATACCGCAAAAGGAAGGTTACTATAAGTTATTCCGAG
ATTGGGAAGCTAGTCAAGAGCACGGGCAAAAAGATGCGGACGTCTATCACCTTAGAGCGA
GCTTTATGAGTATGCTGGACAAGTCTGTCGATTTCGAGGAAATAACAAGTGACTACGCCA
TTCCTAAAGAGTACAAGTACAAGGTTTTTAGATTCGTACCCGTATGCAGACTTTCCAAGG
ATGCGAACGTAAGTGTAGGCATGCAACTAAATCGGAATGGTGGGAACACTGCGACTCAGA
AAGAGCCAACTTCCGTATCTGGATGTAACGAAAGCGATCATGTTCCAATACACGTTGATC
CAATGGCGGTGTGCGGCAATAACGGTCAACATAGGTCTACTCAAACGGCTGTGAATACAT
CACCAGCGCGCGGAGACGAATTGCTATCACCAGAAACTATAGCCGCACTTACAATAGATA
TAGGCCAGTCTGGCCGAAATCAAGGCGACTCCGACGGCATTGGAGACGTCCAACCTCCAA
CAGATCACCGCTTGCCTACCGAATCGCATAACACGGAACTGGGAGAAGTACAGCCGATTC
CGCCGATTCCGCAACAAACCAGTCAGGGAGCATCCGACACGTCGAGTGATTCGGATTTGG
CAGTCGACGAGGTCGTCGTGACGTCGAAAAGGAGCGATTCCGATAAATCCCTCGACGAAA
TAATGGTCGACACCACAGAGCGTCAACTCGACAAGATGGGAGTAACGAAAGAAATGCTCG
GCTGCTGGCGATTGATAATCAAGTACAACAGTCGAACGGTGTTGGAGAGTAGGATCCCAC
TTTTGCAACGGTGCTACCGTGTATGCTTCGGCAACCAAGAGTTTGTGACACGACTGATGA
AAAAGCACGACGCGTTAAATAAATACTGGGACTCGCAGCATTTCAGAATCCTCAAGTTAC
CGCAGTTGGACAGCTACACGTACCCGGTCTCCGATATCCTCTCCCTGTATCGCATGGGTA
TCGCCATCTGGTACTCTCCAGAAGAGCTCACAGTATACGCGTCTCGCCTGTGCCAGAGTC
ATGTATACTACTACGACCCGCACGATCTCCGTACGGGGCCCGAGCTGAAAAAGCTGACGA
GAAGCGAAAGGACGGTGGTATTCTCCTATATCACCTACCTGCAGAGATACCAAACAAAAT
GCCAAGTGCCTCTGGAACACACATGCGTCGAAGACGGTGCGATTACTTTCATCGTTGGTA
CGAAACCGCGCTCGAAAGCTGCGCTGCCGAATATGAAAGGACTGACGATCGAACTGATCC
CTCGTTGCGTGGAAATTTTGAGAGCGATGGCGGAGGATTTCAAGCTGTGCTACAGCCGGC
CGTCGTCTTGCGACGCTGAGTTGAAACGACAAGAGGAAGATGTCGACACTTCTACTGATG
TTGCCTCGGTTTGAT
| SMART |
Interferon_reg_fact_DNA-bd_dom (IPR001346) - T[3-115] 8.1E-4 |
| Gene3D |
WH-like_DNA-bd_sf (IPR036388) - T[4-114] 2.0E-11 |
| PANTHER |
Interferon_reg_fact_DNA-bd_dom (IPR001346) - T[4-503] 1.2E-19 |
| SUPERFAMILY |
WH_DNA-bd_sf (IPR036390) - T[8-114] 7.35E-13 |
| Pfam |
Interferon_reg_fact_DNA-bd_dom (IPR001346) - T[10-112] 1.9E-10 |
| Gene3D |
SMAD-like_dom_sf (IPR017855) - T[297-492] 2.2E-13 |
| SMART |
Interferon_reg_factor-3 (IPR019471) - T[300-492] 7.5E-6 |
| Pfam |
Interferon_reg_factor-3 (IPR019471) - T[354-491] 1.9E-11 |
| SUPERFAMILY |
SMAD_FHA_dom_sf (IPR008984) - T[370-438] 2.36E-5 |
| Protein Name | Identity | Bit Score | e-value |
|---|