Aniseed - Transcript Card

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chr7.g41228.01.t

Possible name(s)

GPN1; GPN2; GPN3

Gene model

Boschl.CG.Botznik2013.chr7.g41228

Location

chr7 [6,972,319 / 6,973,779]

Sequences

Amino acid sequence

Length: 296

>Boschl.CG.Botznik2013.chr7.g41228.01.p
MKTAFGQVVIGPPGSGKTTYCNGMQQFLSALKRPVCIINLDPANDNIPYDCDIDISELIT
LEDVMDNLQLGPNGGLLYCMEYLEANMDWLVEKLKEHTGKYLVFDCPGQVELYTHHSSLK
NVISKLTSKEYDMRLTAVHLVDSHYCSDAHKFVSVLLTSLATMLHISMPHVNVLSKMDVA
EQHGKLAFHLEYYTEVLDLEKLLSLDKSSTFWKKYHKLNEQLCSVIEDYSLVSFIPLNVQ
DKQSMLNVVRQVDNANGYCFGDVEERDIQRLLSTAVGADLQYFKSASVHDKYLNES

Nucleotide sequence

Length: 891

>Boschl.CG.Botznik2013.chr7.g41228.01.t
CATGAAGACAGCATTCGGCCAAGTCGTCATTGGACCGCCGGGTTCTGGCAAAACCACATA
CTGCAATGGCATGCAGCAATTTTTATCTGCCCTAAAACGACCAGTGTGCATTATCAACCT
CGACCCGGCAAATGACAATATACCTTACGATTGCGATATTGACATCAGTGAACTTATAAC
TCTTGAAGACGTCATGGATAACCTGCAACTGGGTCCCAATGGTGGACTCCTATACTGCAT
GGAATATCTTGAAGCTAACATGGACTGGCTTGTTGAAAAATTAAAAGAGCATACGGGAAG
ATATCTTGTATTTGACTGCCCTGGTCAAGTTGAGCTCTACACCCACCATTCTTCACTGAA
AAATGTTATATCCAAACTCACAAGCAAGGAATATGACATGCGTCTCACCGCCGTTCACCT
GGTCGATTCGCATTACTGTTCTGACGCTCACAAATTTGTGTCTGTGCTTTTGACATCTCT
CGCCACCATGCTGCACATCAGCATGCCGCACGTAAATGTGCTTTCGAAGATGGATGTGGC
GGAGCAACATGGAAGGTTGGCGTTTCATTTGGAATATTACACAGAAGTACTTGATCTTGA
AAAACTCTTATCGTTAGATAAAAGTTCCACATTTTGGAAGAAGTATCACAAACTGAATGG
ACAACTTTGTAGCGTCATCGAAGACTACAGTCTTGTCAGTTTCATTCCATTGAACGTTCA
AGATAAGCAAAGCATGCTGAATGTGGTTCGTCAAGTCGATAATGCCAACGGATACTGTTT
TGGTGATGTGGAGGAAAGAGATATTCAGAGGTTGCTGTCAACAGCCGTCGGAGCAGATTT
GCAATATTTCAAAAGTGCATCTGTGCATGACAAATATCTAAATGAATCCTG

InterProScan

PANTHER	Gpn (IPR004130) - T[4-293] 5.7E-130
PANTHER	Gpn2 (IPR030231) - T[4-293] 5.7E-130
SUPERFAMILY	P-loop_NTPase (IPR027417) - T[8-258] 1.08E-45
Pfam	Gpn (IPR004130) - T[9-257] 3.6E-83

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
GPN1_HUMAN	28.161 %	96.3	9.18E-23
GPN2_HUMAN	60.884 %	391	6.59E-138
GPN3_HUMAN	38.047 %	207	4.54E-66