- Transcript 'Phfumi.CG.MTP2014.S6...' >
- Transcript 'Mooccu.CG.ELv1_2.S46...' >
- Transcript 'KH2012:KH.C14.172.v1...' >
- Transcript 'KH2012:KH.C11.196.v1...' >
- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chr7.g46705.01.t
Possible name(s)
GEMIN7; RBM23; RBM39
Gene model
Location
chr7 [4,852,714 / 4,855,025]
Amino acid sequence
Length: 414
>Boschl.CG.Botznik2013.chr7.g46705.01.p
MTMADDIDVEAMLEAPFKKDNAENGDKXDHRSSRKRDXRKRDRSRSRKRSRSRKRSRSRR
SRSPRHSHSRKRSXSRKRSRSRKHRSRSRSRDRRERRRSRXRRSRSKERKRXSRSKEKQK
SPPARIAVAPXLGLSGLPPLNVPERSPSPDDRDARXVFCMQLSQRIRPRDLEDFFSAVGT
VRDVKLXADKHSKRSKGIAYVEFKDMESVPLAXGLSGQKILXVPIIVQPSQAEKNKVVQN
NXQXAVQKGNVGPMKLXVXXLHQNITEDMLKGIFSPFGTIDQDERMLKSLSVDNELAEMR
DNLSLRFGRTIFQCCRYSYEYTLPVNMSMKTDRGDSQEQIDSAYLRERFLKSLLFMTDKQ
ISFELVQTAPMDGVLKACDNKLLQFHVGQLQTPRGVQNEVILRTADVVSCSVHV
Nucleotide sequence
Length: 1,245
>Boschl.CG.Botznik2013.chr7.g46705.01.t
TGACCATGGCTGACGATATCGATGTCGAAGCAATGCTGGAAGCGCCCTTCAAAAAGGACA
ACGCGGAGAACGGTGATAAATCNGATCATAGGTCCAGTAGGAAACGTGACNGNCGAAAAA
GAGATCGTAGCAGGTCAAGAAAACGGAGCAGATCTCGGAAACGTAGCCGATCCCGACGCA
GCCGTTCTCCGAGACACAGTCACTCTCGGAAACGTAGCNGATCGAGAAAACGAAGTAGGT
CCAGAAAACATCGTTCTCGTTCTAGGAGTAGAGACAGAAGAGAGAGGCGAAGATCTAGGG
ANCGTAGAAGCCGATCTAAGGAGAGAAAACGTCGNTCGCGTTCAAAGGAGAAACAAAAAA
GTCCACCAGCTAGAATAGCTGTCGCACCCCCNCTTGGATTATCCGGGCTTCCGCCTTTGA
ACGTGCCAGAGAGATCACCAAGTCCAGACGATCGTGACGCCAGAACNGTCTTCTGCATGC
AGCTATCTCAGAGAATTCGCCCGAGAGATCTCGAAGACTTCTTTTCCGCAGTAGGAACCG
TACGGGACGTGAAATTAATNGCAGACAAGCATTCGAAACGATCAAAAGGCATCGCTTACG
TTGAGTTTAAAGACATGGAATCGGTGCCTCTTGCGTTNGGGCTGAGCGGACAGAAGATTC
TCGGNGTTCCTATCATCGTGCAGCCTTCGCAGGCGGAGAAGAATAAAGTCGTGCAAAATA
ATGCNCAACCNGCCGTGCAAAAGGGGAATGTAGGACCTATGAAGTTGTANGTCGGNTCNT
TACATCAGAATATCACGGAGGACATGCTGAAAGGAATATTCTCACCTTTCGGCACTATTG
ATCAGGATGAACGCATGCTCAAAAGTTTGTCTGTGGACAACGAGTTGGCGGAAATGCGCG
ACAACTTGTCTTTGCGGTTTGGTCGGACCATTTTTCAATGTTGTCGATATAGTTATGAAT
ATACTCTTCCTGTTAACATGTCAATGAAAACCGACCGAGGGGACTCGCAAGAGCAAATTG
ACAGCGCTTATCTCCGCGAAAGATTTCTAAAATCTCTACTGTTTATGACAGGTAAGCAAA
TCTCATTTGAACTTGTGCAAACCGCGCCCATGGACGGAGTGTTGAAGGCATGTGACAACA
AGCTTCTGCAGTTTCACGTCGGACAGCTGCAAACGCCGAGAGGTGTTCAAAATGAAGTAA
TATTACGGACTGCGGACGTGGTATCTTGCTCTGTCCATGTCTAGC
| Gene3D |
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[65-241] 4.9E-21 |
| SUPERFAMILY |
RBD_domain_sf (IPR035979) - T[151-283] 2.79E-23 |
| ProSiteProfiles |
RRM_dom (IPR000504) - T[155-232] 13.754 |
| SMART |
RRM_dom (IPR000504) - T[156-228] 5.1E-12 |
| Pfam |
RRM_dom (IPR000504) - T[157-220] 4.5E-10 |
| ProDom |
SMN_gemin7 (IPR020338) - T[335-409] 1.0E-10 |
| Pfam |
SMN_gemin7 (IPR020338) - T[337-412] 1.9E-19 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RBM39_HUMAN | 42.903 % | 203 | 5.82E-60 |
| RBM23_HUMAN | 48.013 % | 216 | 9.9E-66 |