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TRANSCRIPT CARD

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  1. Transcript 'Boschl.CG.Botznik201...'

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chr7.g49062.01.t

Possible name(s)

CELSR2; CELSR3; FAT4

Gene model

Boschl.CG.Botznik2013.chr7.g49062

Location

chr7 [5,148,356 / 5,158,276]

Sequences

Amino acid sequence

Length: 142

>Boschl.CG.Botznik2013.chr7.g49062.01.p
MPILIVINVTDINDNSPVFLTDSLTSTIATDTASGLIVAHVKATDADIGINADLRYDSPF
YTVRLGNNSTDSPDMMYILTQKITGVTVLMLDITVPTVLTFGVVVKDDGDHTPSNRATAT
ATIYIVNTSDPEPLQPSNQTSP

Nucleotide sequence

Length: 427

>Boschl.CG.Botznik2013.chr7.g49062.01.t
TGCCGATTCTCATCGTCATAAACGTTACCGACATCAATGACAACAGTCCGGTGTTTTTGA
CTGATAGTTTGACGTCAACAATTGCAACCGACACTGCGTCAGGTTTGATCGTAGCGCACG
TCAAGGCGACAGACGCTGATATTGGAATCAACGCCGACTTGAGATATGATTCACCTTTCT
ACACGGTGCGCCTCGGGAACAATTCAACAGGCAGTCCGGACATGATGTATATCCTGACGC
AGAAGATCACGGGTGTGACAGTACTGATGCTAGATATCACGGTGCCAACTGTCTTGACCT
TCGGCGTGGTAGTGAAGGACGACGGTGATCATACGCCGAGTAATAGGGCTACTGCTACAG
CAACCATTTACATCGTCAACACGTCTGACCCAGAACCACTGCAACCATCGAACCAAACCT
CACCAGG

InterProScan

SUPERFAMILY
Cadherin-like (IPR015919) - T[7-136] 3.43E-15
ProSitePatterns
Cadherin_CS (IPR020894) - T[7-17] .
PRINTS
Cadherin (IPR002126) - T[19-48] 6.5E-5 - T[94-113] 6.5E-5 - T[117-134] 6.5E-5

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value