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  1. Transcript 'Boschl.CG.Botznik201...'

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chr7.g50101.01.t

Possible name(s)

GABARAP; GABARAPL1; GABARAPL2

Gene model

Boschl.CG.Botznik2013.chr7.g50101

Location

chr7 [5,432,206 / 5,435,382]

Sequences

Amino acid sequence

Length: 117

>Boschl.CG.Botznik2013.chr7.g50101.01.p
MKWAYKTEHNFEKRKTEGEKIRKKYPDRVPVIVERSEKSTIGDLDKKKYLVPADLTVGQF
YFLIRKRIHLRPEDALFFFVNNVIPPTSTTMGQLYQEHHEEDFFLYVAYSDESVYGG

Nucleotide sequence

Length: 354

>Boschl.CG.Botznik2013.chr7.g50101.01.t
TGAAGTGGGCTTACAAAACGGAACATAATTTTGAAAAAAGAAAGACCGAGGGAGAAAAGA
TTCGCAAGAAGTACCCGGACCGTGTACCGGTAATCGTCGAGCGATCTGAAAAGTCCACGA
TTGGAGATCTTGACAAAAAGAAGTACTTGGTCCCGGCAGATTTGACAGGTGGTCAATTCT
ACTTTCTGATCCGCAAACGAATTCATTTGAGACCAGAAGACGCTCTATTTTTCTTTGTTA
ACAACGTCATCCCGCCGACCAGTACGACCATGGGGCAACTTTATCAGGAACATCATGAAG
AAGATTTCTTTCTTTACGTTGCTTACAGTGATGAGAGCGTTTACGGAGGATGAA

InterProScan

PANTHER
Atg8-like (IPR004241) - T[1-116] 2.0E-74
SUPERFAMILY
Ubiquitin-like_domsf (IPR029071) - T[1-116] 9.04E-43
CDD
Atg8-like (IPR004241) - T[5-116] 9.00334E-69
Pfam
Atg8-like (IPR004241) - T[13-116] 1.0E-48

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
GBRAP_HUMAN 87.069 % 213 2.0E-73
GBRL1_HUMAN 81.034 % 199 6.89E-68
GBRL3_HUMAN 76.724 % 186 7.49E-63