Aniseed - Transcript Card

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chr7.g51522.01.t

Possible name(s)

ANGPT4; TNR; TNXB

Gene model

Boschl.CG.Botznik2013.chr7.g51522

Location

chr7 [5,769,643 / 5,775,185]

Sequences

Amino acid sequence

Length: 249

>Boschl.CG.Botznik2013.chr7.g51522.01.p
MRKNDVVSIHDDLRLCSYIPFSVVFGLTVPLFTSCNGAQLSRIKPEFRFRNGGELTLNIS
GVGLKKVICDVTTDGGNWTIIQRRSGSRVSFSRVWADYVSGFGDQRGDVWLGLNVLHHMT
RKGRCELRIDMIARNGTRFYAKYSDFKVGSSASKYRLTVTGYSGNATDSMWRTSNTNGHS
NGMAFTTRDRDNDLDGSRNCAALMDGGWWYNFCGYTNLNTIPEKMQWLDAGSIGTLPIRY
SEMKFRQRI

Nucleotide sequence

Length: 750

>Boschl.CG.Botznik2013.chr7.g51522.01.t
TATGCGTAAAAATGATGTAGTCAGTATTCACGACGATCTACGACTGTGCTCTTACATTCC
ATTTTCAGTCGTTTTTGGTTTGACAGTGCCACTGTTCACGTCATGCAACGGGGCTCAGCT
GTCCAGAATAAAACCAGAGTTTCGATTCCGTAACGGTGGCGAATTAACGCTGAATATTTC
TGGCGTGGGTCTCAAAAAAGTGATCTGCGATGTGACAACTGATGGCGGCAACTGGACGAT
TATTCAACGGCGATCTGGCAGCCGTGTTAGCTTCTCTCGGGTATGGGCGGATTACGTAAG
TGGATTCGGAGACCAACGAGGGGACGTCTGGCTTGGGCTAAATGTACTTCATCATATGAC
GAGAAAAGGACGTTGCGAGTTACGGATTGATATGATAGCCAGAAACGGCACGCGCTTCTA
CGCGAAATACAGCGATTTCAAAGTTGGATCAAGCGCAAGCAAATACAGGCTGACTGTGAC
AGGATACTCCGGCAACGCGACCGATTCGATGTGGCGGACAAGTAACACGAACGGACATAG
CAATGGCATGGCCTTCACCACCAGGGACCGAGACAACGATCTCGATGGCAGTCGAAATTG
CGCAGCCCTAATGGACGGGGGATGGTGGTATAACTTCTGCGGATATACTAATTTGAATAC
AATCCCGGAAAAAATGCAATGGTTGGATGCAGGATCTATTGGGACCCTTCCGATCAGATA
TAGCGAGATGAAATTTCGCCAGAGGATATA

InterProScan

ProSiteProfiles	Fibrinogen_a/b/g_C_dom (IPR002181) - T[26-249] 38.143
SMART	Fibrinogen_a/b/g_C_dom (IPR002181) - T[30-248] 3.9E-41
SUPERFAMILY	Fibrinogen-like_C (IPR036056) - T[31-245] 3.01E-58
Pfam	Fibrinogen_a/b/g_C_dom (IPR002181) - T[66-220] 3.4E-47

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
FCN1_HUMAN	42.581 %	133	2.56E-37
TENR_HUMAN	41.622 %	139	1.63E-37
ANGP4_HUMAN	42.105 %	137	1.69E-37