Aniseed - Transcript Card

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chr8.g01458.01.t

Possible name(s)

FDPS; GGPS1

Gene model

Boschl.CG.Botznik2013.chr8.g01458

Location

chr8 [1,774,636 / 1,779,660]

Sequences

Amino acid sequence

Length: 259

>Boschl.CG.Botznik2013.chr8.g01458.01.p
MRGLAVASSYLRIVGKDANNENLDLALVVGWAIEIMQASFLVADDIMDQSETRRGKLCWY
KNEGIGLQAINDGMLLESCIYKLLRKYCRTKSYYSDLTDLFREVVMLTELGQSLDMNTSE
KPEVDFSSFTDERYISIVKYKTSFYSFYLPVASALYIGGAANSDTLRKSKEILTEMGCFF
QVQDDFIDCFGDPSITGKIGKDIEDNKCTWLIVQALKRCSQDQRTILEVLICHVRGVGFG
SLMPNPYLILVDGACNVSF

Nucleotide sequence

Length: 780

>Boschl.CG.Botznik2013.chr8.g01458.01.t
TGCGCGGACTAGCAGTGGCTTCTTCATATTTACGGATCGTGGGTAAAGATGCCAATAACG
AGAACCTGGATCTAGCATTGGTTGTTGGATGGGCTATTGAGATTGTGCAAGCTTCATTCT
TGGTCGCTGATGATATCATGGACCAATCAGAAACAAGAAGAGGGAAGCTGTGCTGGTATA
AAAATGAAGGGATTGGGCTACAGGCAATTAACGATGGGATGTTGCTGGAATCGTGCATAT
ATAAATTGTTGAGAAAATATTGTCGGACCAAGTCGTACTATTCTGATTTAACCGACTTAT
TCAGAGAGGTTGTTATGTTAACGGAATTGGGACAATCTTTAGATATGAACACTTCGGAAA
AGCCGGAAGTGGATTTTTCTTCTTTCACCGACGAACGTTATATTTCGATTGTCAAATATA
AGACATCTTTTTACTCGTTTTATCTGCCGGTGGCTTCAGCCTTATACATTGGTGGTGCCG
CAAATTCAGATACTCTCCGCAAGTCGAAAGAAATTTTAACCGAGATGGGATGTTTTTTTC
AAGTTCAAGATGACTTTATAGACTGCTTCGGCGACCCGTCGATAACAGGCAAAATCGGCA
AAGACATCGAAGACAACAAATGCACTTGGCTGATCGTGCAAGCTTTAAAGCGGTGTTCCC
AAGATCAGAGAACTATTTTAGAGGTGCTTATCTGCCATGTTCGAGGTGTTGGGTTTGGAA
GCTTGATGCCTAATCCATATCTCATACTTGTCGATGGCGCCTGCAATGTTTCATTTTAGT

InterProScan

Pfam	Polyprenyl_synt (IPR000092) - T[1-230] 1.3E-72
Gene3D	Isoprenoid_synthase_dom_sf (IPR008949) - T[1-235] 2.1E-78
SUPERFAMILY	Isoprenoid_synthase_dom_sf (IPR008949) - T[14-228] 1.05E-63
ProSitePatterns	Polyprenyl_synt_CS (IPR033749) - T[41-55] . - T[176-188] .

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
FPPS_HUMAN	53.509 %	264	7.17E-87