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TRANSCRIPT CARD

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  1. Transcript 'Boschl.CG.Botznik201...' > 
  2. Molecular Tool 'ZicL- MO (Yagi's 25mer MO)' > 
  3. Transcript 'Phfumi.CG.MTP2014.S5...' > 
  4. Clone 'cijv031b03' > 
  5. Transcript 'Boschl.CG.Botznik201...'

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chr9.g17217.01.t

Possible name(s)

HAO1; HAO2

Gene model

Boschl.CG.Botznik2013.chr9.g17217

Location

chr9 [19,179,556 / 19,180,626]

Sequences

Amino acid sequence

Length: 356

>Boschl.CG.Botznik2013.chr9.g17217.01.p
MDISQLDDCICVKDFAALAEKRVPSNHVTFLNTGAMNEQTLEENCTAFRKWRFQPRCMQD
VTEISLKRTVMGQELEIPIGVAPTGQLNWFSESGEIDAARAAESLGAVYTESSFSSVKCE
DIVSSSPNGLHWFQLYMLKDRNITKNLVENAERSGVKTLVLTADFPILGKRYRYFKAEPI
KLKLAEFDFPGDNFVGLMDNIRECRTTWEYFDWLRSITDLPIVIKGVLTPASALEAVNRG
VSAVWVSNHGGRQLDGVLPTIYALPGIVEAVKGRCPVFFDGGIRSGGDAAKAIALGADCV
FVGRPIVWGVASGGAEGAKRVLEILIDELSMTMKLLGVASIDELKSKPGFVVHESN

Nucleotide sequence

Length: 1,070

>Boschl.CG.Botznik2013.chr9.g17217.01.t
TGGATATATCTCAGCTTGACGACTGTATCTGTGTGAAGGACTTCGCTGCGTTGGCAGAAA
AACGGGTGCCATCGAATCACGTGACCTTCTTAAATACCGGGGCGATGAACGAGCAGACGC
TCGAAGAAAACTGCACCGCCTTCCGCAAATGGAGGTTCCAGCCAAGATGTATGCAGGACG
TTACGGAAATATCCTTGAAACGCACCGTCATGGGGCAAGAGCTCGAAATTCCCATAGGCG
TGGCTCCTACGGGTCAGCTGAATTGGTTCTCAGAGAGCGGTGAAATCGACGCCGCACGTG
CCGCCGAATCACTCGGCGCAGTGTATACGGAAAGCTCCTTCTCCTCTGTAAAGTGTGAGG
ACATCGTATCGTCTTCTCCAAACGGCTTGCATTGGTTTCAGCTGTATATGTTGAAGGACA
GAAACATCACGAAGAATCTTGTAGAAAACGCCGAACGCAGTGGGGTGAAGACGCTCGTAC
TGACGGCGGATTTTCCGATACTGGGAAAACGATATCGATATTTCAAGGCCGAACCGATCA
AATTAAAGCTTGCAGAGTTTGACTTTCCGGGGGACAATTTTGTAGGCCTCATGGACAACA
TACGCGAATGTCGCACCACCTGGGAATACTTCGATTGGCTGAGATCAATCACCGATTTGC
CGATTGTTATCAAGGGCGTGCTTACTCCCGCATCGGCTCTGGAAGCAGTGAATCGCGGAG
TGTCGGCGGTATGGGTGTCCAACCACGGTGGTAGACAGTTAGACGGCGTGCTACCCACGA
TATACGCGTTGCCCGGTATCGTTGAAGCTGTAAAAGGGAGATGCCCGGTATTCTTCGACG
GAGGTATTCGTTCTGGGGGTGATGCAGCCAAGGCAATTGCGTTGGGGGCAGACTGCGTGT
TCGTCGGTCGACCGATAGTCTGGGGTGTCGCCAGTGGTGGAGCGGAAGGGGCAAAAAGAG
TTCTTGAAATACTCATCGACGAATTGTCAATGACGATGAAGCTTCTGGGCGTGGCTTCGA
TTGACGAGCTGAAATCAAAACCGGGTTTTGTTGTGCACGAATCTAACTGT

InterProScan

PIRSF
Alpha-hydoxy_acid_DH_FMN (IPR012133) - T[2-354] 7.1E-115
Gene3D
Aldolase_TIM (IPR013785) - T[2-352] 2.2E-119
ProSiteProfiles
FMN_HAD (IPR037396) - T[4-354] 89.804
CDD
Alpha-hydoxy_acid_DH_FMN (IPR012133) - T[14-344] 3.54942E-140
Pfam
FMN-dep_DH (IPR000262) - T[19-346] 4.0E-110
ProSitePatterns
FMN_hydac_DH_AS (IPR008259) - T[247-253] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
HAOX1_HUMAN 41.193 % 266 6.93E-87
HAOX2_HUMAN 40.828 % 266 2.44E-87