Aniseed - Transcript Card

Transcript 'Boschl.CG.Botznik201...'

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chr9.g38049.01.t

Possible name(s)

FAF1; FAF2

Gene model

Boschl.CG.Botznik2013.chr9.g38049

Location

chr9 [21,712,451 / 21,717,133]

Sequences

Amino acid sequence

Length: 503

>Boschl.CG.Botznik2013.chr9.g38049.01.p
MDNGEPQEDTNEAELSQEQTENLLHFQQITNNDDLEQCKRIMRAHHWNVELAVQSTLPGF
AEAPRSSAPPAIPSLSSSSVHGLRQRNVGLQPHMHPLLNTRFYEARSSTSLVRPQGAIGW
GYYLLSGPFRWAWITFSGIVKFFIRLFITEPRMAIVNPLGDVQDFIKEYEESFGSSHPKF
VQGTYADAQNEARRSLRFLLVYLHDPDHRDTESFCRNTLSNTDVIELIDRNFVFWACSTR
KPEGYRVSKSMRENTHPFLAVICSIRGKLTIVGRLEGPLTSQEFMEQASALIDHFEPALE
AARADKADRDMTQILRNEQDAAYEQSLQEDKEKEEKRKKDEEMKLIKEQELAEKNRMKAD
EEERHLTRKKSCKEMLLEEPESNHPDTVKLLIKLPDGSRLTRNFLSTQPIKVIHDYIYCQ
ETAPRRFQVTTNFPRRVIPGCSTTEILATEADMPIKSDGPSMFQEIDTSNRCHDCDLSIA
QSGLKNSEMIFVQAIDDSDDEES

Nucleotide sequence

Length: 1,512

>Boschl.CG.Botznik2013.chr9.g38049.01.t
TGGATAATGGCGAGCCCCAAGAAGACACAAATGAAGCAGAACTCAGTCAGGAACAAACTG
AAAATCTGCTACATTTTCAGGAAATCACAAACAACGATGACTTGGAACAGTGCAAGAGAA
TTATGAGGGCACATCATTGGAATGTTGAGTTGGCGGTACAGTCGACACTTCCTGGTTTTG
CCGAAGCTCCGCGATCCTCTGCTCCTCCAGCTATTGCGTCTTTATCATCGAGTTCAGTTC
ACGGCCTGCGGCAGAGAAATGTAGGCTTGCAGCCTCATATGCACCCTCTTCTCAACACGC
GTTTTTATGAAGCGAGAAGTTCAACTAGTCTGGTTCGACCTCAAGGGGCAATTGGCTGGG
GCTACTATCTATTGTCGGGGCCATTTCGGTGGGCCTGGATCACATTTTCTGGTATTGTAA
AGTTTTTCATAAGGCTCTTCATAACCGAACCTCGTATGGCAATAGTCAACCCCTTGGGAG
ACGTGCAAGATTTTATCAAAGAGTACGAAGAATCATTCGGATCAAGTCATCCAAAGTTTG
TCCAGGGAACGTACGCGGACGCACAAAACGAAGCTCGCAGGTCGTTGCGTTTTCTTCTTG
TTTACTTGCACGACCCGGATCACAGGGATACAGAGAGCTTCTGCAGAAACACATTGTCGA
ACACGGACGTGATAGAATTGATTGACAGAAACTTTGTATTTTGGGCTTGCTCAACACGTA
AACCAGAAGGATATAGAGGATCCAAGTCGATGCGAGAGAATACTCATCCGTTTCTGGCAG
TTATATGCTCGATACGCGGAAAATTAACAATCGTAGGGAGATTGGAAGGTCCCCTGACCT
CTCAGGAATTTATGGAGCAAGCCAGCGCGCTCATCGATCATTTTGAACCTGCTCTAGAAG
CGGCGAGGGCCGATAAAGCAGACCGGGACATGACTCAGATACTCAGAAATGAGCAGGACG
CTGCTTACGAGCAATCTTTACAAGAGGACAAAGAAAAGGAGGAAAAGCGGAAGAAAGACG
AGGAAATGAAGTTGATCAAAGAGCAAGAGTTGGCGGAAAAAAATAGGATGAAAGCCGATG
AGGAAGAACGACATTTGACGAGAAAAAAATCCTGCAAAGAAAGGTTGCTGGAGGAACCGG
AATCCAACCATCCTGACACCGTGAAACTGCTTATTAAACTGCCTGATGGATCTCGGCTGA
CACGTAATTTTCTATCCACACAACCGATCAAGGTAATCCATGACTACATATATTGTCAAG
AAACAGCGCCTCGTCGATTTCAAGTTACCACCAACTTCCCCCGAAGAGTTATTCCGGGCT
GTAGCACGACCGAAATTCTTGCCACAGAAGCCGACATGCCCATCAAATCTGACGGCCCGT
CAATGTTTCAAGAAATCGACACATCAAACCGTTGTCACGATTGTGATTTGTCAATAGCGC
AGAGCGGTCTAAAAAACTCGGAAATGATTTTCGTGCAAGCAATTGACGACTCCGATGACG
AGGAGTCCTGAA

InterProScan

SUPERFAMILY	Thioredoxin-like_sf (IPR036249) - T[156-302] 1.12E-28
SMART	UAS (IPR006577) - T[164-289] 8.8E-42
SUPERFAMILY	Ubiquitin-like_domsf (IPR029071) - T[348-439] 1.22E-17
ProSiteProfiles	UBX_dom (IPR001012) - T[383-457] 15.712
Pfam	UBX_dom (IPR001012) - T[383-438] 4.5E-10

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
FAF2_HUMAN	37.805 %	324	2.51E-106
FAF1_HUMAN	26.599 %	101	8.87E-23