- Transcript 'Cisavi.CG.ENS81.R17....' >
- Clone 'cima836893' >
- Transcript 'KH2012:KH.C6.158.v2....' >
- Transcript 'Phmamm.CG.MTP2014.S4...' >
- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chr9.g44470.01.t
Possible name(s)
LPAR1; LPAR2; S1PR2
Gene model
Location
chr9 [15,883,764 / 15,885,111]
Amino acid sequence
Length: 448
>Boschl.CG.Botznik2013.chr9.g44470.01.p
MNTSPPNTGIYNQTSSGRIPEKNTVSYQDTFPSAIKCEPIDSLPLAIVSGXVATATIFAN
LXXIIAILRGSSHFHRPIYWVIIHLSCADLIVGIMLLWNYCFASLFDIGNTYKSLLMVFC
LWVSSEASSTIGFVLLAIDRYVQIFHKHFHRAYATRVTVGICIAFAWVYSLGVFSIAPMF
GWSCHNCTCPXKEYMQCMPMTECSQILPPFTKTYTLTIACMLVVCIPVPVAIYXTIFFKV
KQAAPRVLRQSKRRHDMRLIKTLSVILIVFIITLSPVAILLFFDYTQSERDEVMISIAFY
IFVLAFLNXLANPLLYIWRMKPIRTSIRKLLCLSNAYGSRRDITSHYNSENRSPXMNRHD
AXESRFLATXNNNKPHAVTLCLRQIKRGRYSNSKTSTPLSDRACNHRHKSIARISRDIDR
EMESDNPEERDCLDAAQANGGNCVVTGV
Nucleotide sequence
Length: 1,347
>Boschl.CG.Botznik2013.chr9.g44470.01.t
TATGAATACATCACCACCCAACACTGGAATATACAACCAAACCAGCAGCGGAAGAATTCC
TGAAAAGAACACTGTTTCATATCAAGACACATTCCCGAGCGCCATCAAATGCGAACCGAT
AGACTCCTTACCCCTGGCCATCGTGTCGGGGGCNGTCGCCACGGCCACCATCTTCGCGAA
CTTGTTNGTNATCATAGCAATACTACGAGGATCGTCTCATTTTCACCGCCCCATCTACTG
GGTGATTATACATCTCAGCTGCGCGGATCTGATAGTTGGGATAATGCTTTTGTGGAATTA
CTGCTTCGCGTCGCTATTTGACATCGGTAACACATACAAAAGTTTATTAATGGTGTTCTG
CCTATGGGTATCGTCCGAGGCATCCTCTACCATAGGGTTCGTTCTACTTGCGATAGACCG
TTACGTGCAGATATTTCACAAACATTTTCATCGAGCCTACGCCACACGGGTGACTGTGGG
AATATGCATCGCTTTTGCATGGGTCTACTCTCTTGGCGTATTTTCGATAGCGCCAATGTT
CGGGTGGTCTTGTCATAACTGTACCTGTCCGCANAAGGAGTACATGCAGTGCATGCCGAT
GACTGAATGCTCCCAAATCCTGCCGCCCTTCACGAAAACCTACACGCTCACCATCGCATG
TATGCTGGTGGTGTGTATACCGGTACCGGTGGCGATTTACGGNACAATATTTTTCAAAGT
CAAGCAGGCCGCGCCCCGCGTACTGCGGCAAAGCAAGCGGAGACATGACATGAGACTAAT
CAAGACTTTATCAGTGATATTAATTGTGTTTATTATAACGTTAAGTCCAGTCGCGATACT
GTTGTTTTTCGACTATACACAGTCGGAACGCGACGAGGTCATGATCAGCATCGCGTTTTA
CATATTTGTGCTGGCTTTCCTGAACTCNCTAGCTAACCCTTTGTTGTATATATGGCGGAT
GAAACCCATCCGTACTTCGATACGTAAGCTGTTATGCCTTTCCAACGCGTATGGCTCACG
TCGGGACATAACCTCGCATTACAACAGCGAGAACCGTTCGCCCACNATGAACCGTCACGA
CGCGCCNGAATCTCGTTTCTTAGCAACCGANAACAACAACAAACCTCACGCCGTGACTCT
ATGCCTACGTCAAATCAAAAGGGGAAGGTACAGCAACAGTAAGACGTCCACGCCCTTGTC
TGACAGAGCTTGCAACCACCGGCACAAGTCCATAGCAAGAATATCGCGCGACATCGACCG
TGAGATGGAGAGCGACAATCCGGAGGAAAGAGACTGTCTGGACGCCGCACAGGCTAACGG
AGGAAATTGCGTGGTGACCGGAGTATG
| PRINTS |
GPCR_Rhodpsn (IPR000276) - T[44-68] 8.6E-13 - T[78-99] 8.6E-13 - T[122-144] 8.6E-13 - T[259-283] 8.6E-13 - T[298-324] 8.6E-13 |
| SMART |
GPCR_Rhodpsn (IPR000276) - T[53-331] 0.0067 |
| ProSiteProfiles |
GPCR_Rhodpsn_7TM (IPR017452) - T[59-316] 23.862 |
| Pfam |
GPCR_Rhodpsn (IPR000276) - T[60-316] 1.5E-20 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| LPAR1_HUMAN | 28.428 % | 87 | 1.03E-18 |
| LPAR2_HUMAN | 24.749 % | 87 | 9.91E-19 |
| S1PR2_HUMAN | 26.846 % | 85.9 | 2.16E-18 |