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- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chr9.g49112.01.t
Possible name(s)
DMRT1; DMRTA1; DMRTA2
Gene model
Location
chr9 [9,601,152 / 9,601,685]
Amino acid sequence
Length: 133
>Boschl.CG.Botznik2013.chr9.g49112.01.p
MAAHDSTAQSPFSSAVQITSHSPKSALAMRSDKYPRTPKCARCRNHDVVSALKGHKRYCR
WKDCTCAKCTLIAERQRVMAAQVALRRQQAQEESDAREFRLLYSAGEKNNENSLETVSHM
DRQRLGIHNIYSA
Nucleotide sequence
Length: 402
>Boschl.CG.Botznik2013.chr9.g49112.01.t
AATGGCTGCACATGACAGCACAGCACAGTCGCCATTTTCTTCAGCGGTTCAGATAACGTC
GCATTCGCCCAAATCTGCCTTGGCCATGCGTTCTGACAAGTATCCTCGCACCCCGAAATG
TGCTAGATGCAGAAATCATGACGTGGTCAGCGCGCTAAAAGGTCACAAGCGGTACTGCAG
ATGGAAGGACTGCACGTGCGCCAAGTGCACGTTAATAGCGGAAAGACAACGCGTCATGGC
GGCCCAGGTCGCGCTCCGCAGACAACAAGCACAAGAAGAAAGTGACGCACGCGAATTTCG
GCTCCTGTATTCGGCAGGCGAGAAAAATAATGAGAATTCCCTGGAAACCGTGTCGCATAT
GGACCGACAAAGACTGGGTATACATAACATATATTCAGCATA
| PANTHER |
DMRT/dsx/mab-3 (IPR026607) - T[8-114] 1.5E-51 |
| Gene3D |
DM_DNA-bd_sf (IPR036407) - T[33-82] 4.7E-24 |
| SUPERFAMILY |
DM_DNA-bd_sf (IPR036407) - T[34-82] 4.71E-18 |
| SMART |
DM_DNA-bd (IPR001275) - T[36-89] 1.7E-29 |
| Pfam |
DM_DNA-bd (IPR001275) - T[36-82] 3.0E-23 |
| ProSitePatterns |
DM_DNA-bd (IPR001275) - T[40-69] . |
| ProSiteProfiles |
DM_DNA-bd (IPR001275) - T[40-87] 14.224 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| DMTA2_HUMAN | 85.714 % | 145 | 2.35E-42 |
| DMRTA_HUMAN | 83.562 % | 136 | 4.58E-39 |
| DMRT1_HUMAN | 76.119 % | 114 | 1.3E-31 |