Aniseed - Transcript Card

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chr9.g52585.01.t

Possible name(s)

SLC6A14; SLC6A5; SLC6A7

Gene model

Boschl.CG.Botznik2013.chr9.g52585

Location

chr9 [12,751,818 / 12,762,971]

Sequences

Amino acid sequence

Length: 344

>Boschl.CG.Botznik2013.chr9.g52585.01.p
VWKDAATQIFFSLSAAWGGLVALSSYNRFNNNCFYDSLIVCIANCCTSLFAGFAIFTIVG
NMAYTLKRPVEEVVQSGFGLAFIAYPEALSLLPGSSGWAIIFFLMLFTLGLDSQFTILET
VATAVIDAFPATFRTRRWQLTLILAVVMFCLGLTCVTDTGIYYVNLVDHYSAGWGLLIVA
VMECIGVCWIYGGNRFIKDIEMMIGEQNFWFWLYWRACWFFITPLLLLAVLIWSLITFSP
ASYAGYEYPPWAEGLGWASIGFGLLFIPVMAIVEIVRNDCSIMKASNPTKDWGPYLKKFR
GERYANMAEPVEAIAISKQNEKEGHNPAYVEDEANNDHTDQTKM

Nucleotide sequence

Length: 1,035

>Boschl.CG.Botznik2013.chr9.g52585.01.t
GGTTTGGAAGGATGCCGCGACTCAAATCTTCTTTTCACTGAGCGCTGCTTGGGGTGGATT
GGTGGCCTTGTCTTCCTACAATCGCTTCAACAATAACTGCTTCTACGACTCTTTGATTGT
TTGCATCGCCAACTGCTGTACCTCGCTTTTTGCTGGATTCGCGATATTCACCATTGTCGG
AAATATGGCTTACACTCTCAAAAGACCGGTTGAAGAGGTAGTCCAGTCAGGTTTTGGTCT
GGCGTTTATCGCGTATCCGGAAGCCCTCTCCCTTCTGCCAGGATCTTCAGGCTGGGCGAT
CATCTTCTTCCTTATGTTGTTCACTCTGGGCCTGGACAGTCAATTCACCATTTTGGAAAC
CGTCGCCACGGCTGTCATTGACGCATTCCCGGCCACTTTCCGCACTAGACGGTGGCAGTT
GACGTTGATTCTGGCTGTTGTGATGTTCTGCTTGGGACTGACTTGCGTTACTGAGACTGG
AATCTACTACGTTAATCTAGTCGATCATTATTCGGCTGGCTGGGGTCTGCTCATTGTAGC
TGTGATGGAATGCATCGGCGTGTGCTGGATATATGGAGGAAACCGATTCATCAAAGACAT
TGAAATGATGATTGGCGAGCAGAATTTCTGGTTTTGGCTTTATTGGAGGGCGTGCTGGTT
TTTCATAACACCGCTGCTGTTACTGGCGGTTCTCATTTGGTCGCTCATCACATTCTCGCC
TGCATCATATGCTGGCTATGAATATCCTCCGTGGGCTGAGGGACTTGGATGGGCGTCTAT
CGGATTCGGCTTACTGTTTATCCCAGTGATGGCGATCGTCGAAATCGTACGAAACGACTG
CAGTATCATGAAGGCGTCCAATCCTACCAAAGATTGGGGCCCCTATCTCAAGAAATTCCG
AGGCGAGCGTTATGCAAATATGGCGGAACCGGTAGAAGCCATCGCGATCAGTAAACAGAA
TGAAAAAGAAGGCCATAATCCCGCCTACGTGGAAGACGAGGCCAACAACGACCACACTGA
TCAAACTAAAATGTG

InterProScan

SUPERFAMILY	SNS_sf (IPR037272) - T[1-275] 1.96E-84
PANTHER	Na/ntran_symport (IPR000175) - T[1-288] 5.5E-120
ProSiteProfiles	Na/ntran_symport (IPR000175) - T[1-280] 53.988
Pfam	Na/ntran_symport (IPR000175) - T[1-277] 7.8E-95
PRINTS	Na/ntran_symport (IPR000175) - T[38-58] 2.7E-30 - T[92-111] 2.7E-30 - T[173-193] 2.7E-30 - T[216-236] 2.7E-30

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
SC6A7_HUMAN	43.831 %	251	1.82E-78
SC6A5_HUMAN	46.984 %	303	1.44E-96
S6A14_HUMAN	56.688 %	364	5.04E-122