- Gene 'KH2012:KH.C9.641' >
- >
- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chr9.g52628.01.t
Possible name(s)
TBX1; TBX10; TBX18
Gene model
Location
chr9 [12,779,730 / 12,780,129]
Amino acid sequence
Length: 110
>Boschl.CG.Botznik2013.chr9.g52628.01.p
MFPTFQVNLFGMDPSSEYILMVDFVPVDDKRYRYAFHSSSWLVAGKADPSMPPRIHRHPD
SPAKGSHWMKQIVSFDKLKLTNNLLDDKGHVSWMCNVQCALYNEYLPGSM
Nucleotide sequence
Length: 333
>Boschl.CG.Botznik2013.chr9.g52628.01.t
TGTTCCCGACCTTCCAAGTTAACCTATTCGGAATGGATCCTTCATCTGAGTACATACTGA
TGGTGGATTTCGTGCCGGTCGACGACAAGCGATACCGATACGCTTTTCACAGGTCAAGTT
GGCTTGTGGCCGGCAAAGCCGATCCGTCCATGCCCCCTCGAATACATCGACATCCAGACT
CTCCCGCCAAGGGATCGCATTGGATGAAGCAGATCGTGTCTTTTGATAAGTTGAAGCTCA
CCAATAATCTGTTGGACGATAAGGGCCATGTGAGTTGGATGTGCAATGTGCAATGTGCAT
TGTACAATGAGTACTTACCCGGGTCGATGTAAT
| SMART |
TF_T-box (IPR001699) - T[1-110] 1.5E-14 |
| Pfam |
TF_T-box (IPR001699) - T[1-91] 2.8E-28 |
| Gene3D |
T-box_sf (IPR036960) - T[1-107] 6.8E-40 |
| PANTHER |
TF_T-box (IPR001699) - T[1-91] 1.8E-57 |
| ProSiteProfiles |
TF_T-box (IPR001699) - T[1-110] 35.143 |
| SUPERFAMILY |
p53-like_TF_DNA-bd (IPR008967) - T[1-92] 6.21E-33 |
| PRINTS |
TF_T-box (IPR001699) - T[56-69] 7.1E-7 - T[73-82] 7.1E-7 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TBX18_HUMAN | 60.44 % | 134 | 5.0E-38 |
| TBX1_HUMAN | 82.418 % | 167 | 6.39E-52 |
| TBX10_HUMAN | 73.626 % | 153 | 1.14E-46 |