- Transcript 'KH2012:KH.C3.74.v7.C...' >
- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chr9.g54097.01.t
Possible name(s)
SNX18; SNX33; SNX9
Gene model
Location
chr9 [3,037,766 / 3,040,836]
Amino acid sequence
Length: 514
>Boschl.CG.Botznik2013.chr9.g54097.01.p
MLYAFDGISENHELTLSEGDFVTITDADVGEGWFEGQDANGTVGLFPSGYAQVVPDAGFE
NGTDAITPTQQQDLMGSFAPSQDNAGYQGDDYADDDWEASWGAQAVTPAAVVAPTTQIDR
SASQKSTTSVAKVDGDSPKKSGKGGLFGGLFSSFSSTPSEAFVAGESDKVDTSGKPRIIL
TMTDELPMWEYSNKHFTCVVSDPQKASKFSGLKSYITYNITPDDTGKTVTRRYKHFDWLL
EQLTKKFSTIISIPPLPDKQITGRYEDEFIENRRQQLHTWIARMSLHPVVADSEVFQHFL
RSKDSEKAWKDGKRKAESDVAVGGALCSTITPLEQYRIELADAEATLQLNTQFTKNLDDA
LKQMTAHGAEYARKCAGPLTREYQRTGQCFGAIANAFALDTRETSVPLTNALQHTGIVSC
FPNILGNNKSGIDKQKEIQKLHLEGKCTSEDVDNAKLRAETLSYAVQAEVNHMQHYRVGD
FTEFMRSFTQQQVVFYQNIVAKLQETASLYENLQ
Nucleotide sequence
Length: 1,545
>Boschl.CG.Botznik2013.chr9.g54097.01.t
AATGCTGTACGCTTTCGACGGCATATCGGAAAATCACGAATTGACACTTTCGGAAGGGGA
TTTCGTTACAATAACAGACGCCGATGTCGGTGAAGGATGGTTCGAAGGACAAGACGCGAA
TGGGACTGTCGGACTTTTTCCATCCGGCTACGCTCAAGTTGTACCTGATGCGGGGTTTGA
AAACGGTACCGACGCGATAACCCCCACGCAACAGCAAGATCTCATGGGCTCTTTCGCTCC
CTCGCAAGATAACGCTGGTTATCAAGGCGACGATTATGCAGACGATGACTGGGAAGCCTC
CTGGGGTGCACAGGCGGTAACGCCTGCTGCTGTAGTTGCACCCACTACTCAAATTGACCG
ATCTGCGTCTCAAAAAAGCACCACTAGCGTCGCAAAAGTGGATGGCGATTCGCCAAAGAA
ATCAGGAAAGGGCGGATTGTTCGGTGGTTTATTCTCATCATTTTCATCCACTCCGTCCGA
AGCGTTTGTAGCCGGTGAATCAGACAAAGTCGACACATCTGGAAAACCTAGAATTATTCT
CACCATGACGGACGAATTACCAATGTGGGAATATTCCAATAAACATTTCACGTGTGTCGT
ATCCGATCCGCAGAAAGCCAGCAAGTTCTCGGGCTTGAAGAGTTATATAACTTACAACAT
CACGCCGGACGACACTGGTAAAACAGTCACGAGACGGTATAAACACTTTGATTGGCTCCT
CGAGCAGTTGACGAAGAAATTCAGCACTATCATCTCCATTCCACCGCTTCCGGACAAGCA
AATCACCGGTCGCTACGAAGACGAATTTATCGAAAATCGACGGCAACAGTTGCACACGTG
GATTGCCAGAATGTCCCTACACCCTGTCGTCGCGGACTCTGAAGTTTTCCAGCATTTTCT
CCGTTCGAAAGACTCGGAAAAGGCTTGGAAGGATGGAAAACGCAAAGCGGAAAGTGACGT
GGCGGTCGGCGGTGCGCTCTGCTCGACCATAACCCCACTTGAGCAGTATAGAATCGAACT
GGCGGATGCCGAAGCTACGCTGCAACTCAACACTCAGTTCACGAAGAATTTGGACGACGC
GTTGAAGCAAATGACGGCTCACGGCGCGGAATATGCGCGAAAATGTGCAGGCCCTTTAAC
GCGGGAATACCAGAGAACTGGACAATGCTTCGGCGCGATAGCAAACGCTTTTGCTTTAGA
CACCAGAGAAACGTCGGTACCGTTAACGAATGCTTTACAGCACACAGGTATAGTATCATG
CTTTCCGAATATTCTTGGTAACAACAAGAGTGGCATCGACAAGCAAAAGGAAATACAAAA
ACTGCACCTGGAAGGCAAATGCACGAGTGAGGATGTGGATAATGCAAAATTGCGGGCGGA
GACGTTATCGTATGCAGTACAAGCCGAGGTCAACCACATGCAGCATTACAGAGTCGGCGA
TTTCACGGAGTTCATGAGAAGTTTCACCCAACAACAAGTCGTCTTCTATCAGAATATAGT
CGCCAAGTTGCAAGAAACTGCGAGCCTGTATGAGAACTTGCAATG
| ProSiteProfiles |
SH3_domain (IPR001452) - T[1-56] 12.713 |
| SMART |
SH3_domain (IPR001452) - T[2-55] 6.2E-7 |
| SUPERFAMILY |
SH3-like_dom_sf (IPR036028) - T[2-56] 3.28E-12 |
| Pfam |
SH3_domain (IPR001452) - T[3-51] 5.7E-8 |
| PANTHER |
SNX9 (IPR028644) - T[81-416] 3.3E-103 - T[414-510] 3.3E-103 |
| Gene3D |
PX_dom_sf (IPR036871) - T[177-310] 3.9E-40 |
| SUPERFAMILY |
PX_dom_sf (IPR036871) - T[193-304] 2.49E-27 |
| SMART |
Phox (IPR001683) - T[193-303] 1.6E-21 |
| ProSiteProfiles |
Phox (IPR001683) - T[196-307] 17.276 |
| Pfam |
Phox (IPR001683) - T[198-302] 8.7E-21 |
| Pfam |
Sorting_nexin_WASP-bd-dom (IPR019497) - T[306-416] 3.8E-28 |
| Gene3D |
AH/BAR_dom_sf (IPR027267) - T[353-415] 7.9E-14 - T[416-513] 1.6E-28 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SNX33_HUMAN | 30.849 % | 278 | 6.4E-87 |
| SNX9_HUMAN | 39.891 % | 291 | 9.33E-92 |
| SNX18_HUMAN | 36.911 % | 222 | 4.62E-65 |