- Transcript 'Boschl.CG.Botznik201...' >
- Transcript 'Cisavi.CG.ENS81.R978...' >
- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chr9.g55193.03.t
Possible name(s)
FLNA; FLNB; FLNC
Gene model
Location
chr9 [4,535,655 / 4,549,492]
Amino acid sequence
Length: 3,195
>Boschl.CG.Botznik2013.chr9.g55193.03.p
MRTKLQDHKDGTCDVEYFPTEAGDYEVNVTFDSKPVPGSPFTVPIKDRVDPSKVKCSGPG
ISPGARKGVPQEFLIDCKKAGVAPLEVAAKGPRGVRDDVDVIDNGDGTHTARYTPSTEGL
YQMQVRYDDQDVPEMPKRIRVLPTHEADKVKCSGPGIASTVDASMPTEFTIDAKEAGDGV
LAVQVTDPEGYPKKPKIVDNGXGTYKVTYLPDMTGRYQVSVKYGGDEVPYSPFRTRATPV
GDANKXDXSGDGLGPTVPVGKENVITVDAXKXGPGXVTCXVTTPDDGLLNAEVVENKDRT
YDVFYTPPKPGPYAINLRYGGEPVKDSPYNVKALDESDMLRAVDFVFEVPQRPGDLTSVV
HMPSGRTGEPNIINNGDGTISISYTPTEAGLHEMDILFDKEHIPGSPVQFYVDAIAPGHV
TAFGPGLVTGRVEKPAEFTVVTKDAGAGGLALAIEGPSKAEITCNDNKDGTCSFSYVPTA
AGEYQITIKFDDEHIHGSPFTANISDGSTPRAATIVPGTMTDFALKINETDLTQLTASIE
SPSGKKEDCQLKRLPNGHIGISFTPHEVGEHLVSVKKRGRHVANSPFRIMVSEAEIGDAS
KVKVYGSGIEKAKAGELAELYVDTREAGYGGLGLSVEGPSKVDIECHDEKDGVCRVTYTP
REPGVYNVNVKFAENHVPGSPFTVKCTGEGTQTQSIQRERKAPSIATVGSTCDLNLKIPK
ADIRDLSASVMSPSGEVEEAQVYESGDNTYSIRFVPKEMGVHTVSVKYLGDHVPGSPFQF
TVGPLGAGGAGKVTAGGPGLESATVNVPADFNIWTREAGAGGLSIAVEGPSKAEINFEDR
KDGSCGVSYIATEPGEYEVSVKFNDEHIPGSPFPVTVTGKSGSVPRFHQSDASKVTSYGG
GLRRAKVGEDNTFTVDCSSAGSNMLLVGVHGPETPCEEVYVKHIGDRRYTVTYTARDAGE
YTLIVKWGEDHIPGSPFLVRIPMRTKLQDHKDGTCDVEYFPTEAGDYEVNVTFDSKPVPG
SPFTVPIKDRVDPSKVKCSGPGISPGARKGVPQEFLIDCKKAGVAPLEVAAKGPRGVRDD
VDVIDNGDGTHTARYTPSTEGLYQMQVRYDDQDVPEMPKRIRVLPTHEADKVKCSGPGIA
STVDASMPTEFTIDAKEAGDGVLAVQVTDPEGYPKKPKIVDNGXGTYKVTYLPDMTGRYQ
VSVKYGGDEVPYSPFRTRATPVGDANKXDXSGDGLGPTVPVGKENVITVDAXKXGPGXVT
CXVTTPDDGLLNAEVVENKDRTYDVFYTPPKPGPYAINLRYGGEPVKDSPYNVKALDESD
MLRAVDFVFEVPQRPGDLTSVVHMPSGRTGEPNIINNGDGTISISYTPTEAGLHEMDILF
DKEHIPGSPVQFYVDAIAPGHVTAFGPGLVTGRVEKPAEFTVVTKDAGAGGLALAIEGPS
KAEITCNDNKDGTCSFSYVPTAAGEYQITIKFDDEHIHGSPFTANISDGSTPRAATIVPG
TMTDFALKINETDLTQLTASIESPSGKKEDCQLKRLPNGHIGISFTPHEVGEHLVSVKKR
GRHVANSPFRIMVSEAEIGDASKVKVYGSGIEKAKAGELAELYVDTREAGYGGLGLSVEG
PSKVDIECHDEKDGVCRVTYTPREPGVYNVNVKFAENHVPGSPFTVKCTGEGTQTQSIQR
ERKAPSIATVGSTCDLNLKIPMNYLQTSSSATSSSAFRQSYSMTEHTRIQQAAGQKHITQ
ETSQSVLGRGNKAMPFVPVFTHRSGLGVFQHTAKLKEADIRDLSASVMSPSGEVEEAQVY
ESGDNTYSIRFVPKEMGVHTVSVKYLGDHVPGSPFQFTVGPLGAGGAGKVTAGGPGLESA
TVNVPADFNIWTREAGAGGLSIAVEGPSKAEINFEDRKDGSCGVSYIATEPGEYEVSVKF
NDEHIPGSPFPVTVTGKSGSVPRFHQSDASKVTSYGGGLRRAKVGEDNTFTVDCSSAGSN
MLLVGVHGPETPCEEVYVKHIGDRRYTVTYTARDAGEYTLIVKWGEDHIPGSPFLVRIPM
RTKLQDHKDGTCDVEYFPTEAGDYEVNVTFDSKPVPGSPFTVPIKDRVDPSKVKCSGPGI
SPGARKGVPQEFLIDCKKAGVAPLEVAAKGPRGVRDDVDVIDNGDGTHTARYTPSTEGLY
QMQVRYDDQDVPEMPKRIRVLPTHEADKVKCSGPGIASTVDASMPTEFTIDAKEAGDGVL
AVQVTDPEGYPKKPKIVDNGXGTYKVTYLPDMTGRYQVSVKYGGDEVPYSPFRTRATPVG
DANKXDXSGDGLGPTVPVGKENVITVDAXKXGPGXVTCXVTTPDDGLLNAEVVENKDRTY
DVFYTPPKPGPYAINLRYGGEPVKDSPYNVKLSRFQFATESSSRVTGSSSSHSVIEFESG
SKXPCSLFRIEFKSGSTHFCETLGXXXXXXXXXXXXXPTPELVQEEMIEAVDTAPAHAYM
AGPGADELVQALDESDMLRAVDFVFEVPQRPGDLTSVVHMPSGRTGEPNIINNGDGTISI
SYTPTEAGLHEMDILFDKEHIPGSPVQFYVDAIAPGHVTAFGPGLVTGRVEKPAEFTVVT
KDAGAGGLALAIEGPSKAEITCNDNKDGTCSFSYVPTAAGEYQITIKFDDEHIHGSPFTA
NISDGSTPRAATIVPGTMTDFALKINETDLTQLTASIESPSGKKEDCQLKRLPNGHIGIS
FTPHEVGEHLVSVKKRGRHVANSPFRIMVSEAEIGDASKVKVYGSGIEKAKAGELAELYV
DTREAGYGGLGLSVEGPSKVDIECHDEKDGVCRVTYTPREPGVYNVNVKFAENHVPGSPF
TVKCTGEGTQTQSIQRERKAPSIATVGSTCDLNLKIPMNYLQTSSSATSSSAFRQSYSMT
EHTRIQQAAGQKHITQETSQSVLGRGNKAMPFVPVFTHRSGLGVFQHTAKLKEADIRDLS
ASVMSPSGEVEEAQVYESGDNTYSIRFVPKEMGVHTVSVKYLGDHVPGSPFQFTVGPLGA
GGAGKVTAGGPGLESATVNVPADFNIWTREAGAGGLSIAVEGPSKAEINFEDRKDGSCGV
SYIATEPGEYEVSVKFNDEHIPGSPFPVTVTGKSGSVPRFHQSDASKVTSYGGGLRRAKV
GEDNTFTVDCSSAGSNMLLVGVHGPETPCEEVYVKHIGDRRYTVTYTARDAGEYTLIVKW
GEDHIPGSPFLVRIP
Nucleotide sequence
Length: 3,471
>Boschl.CG.Botznik2013.chr9.g55193.03.t
TATGCGTACCAAATTACAGGATCACAAAGACGGCACATGCGACGTGGAATATTTCCCGAC
GGAAGCTGGCGATTACGAAGTCAACGTCACGTTCGACTCGAAACCAGTGCCCGGGTCTCC
GTTCACAGTTCCGATCAAGGATCGCGTCGACCCATCGAAGGTGAAATGTTCCGGCCCGGG
AATATCGCCCGGCGCTAGAAAGGGCGTGCCTCAGGAATTTTTGATCGATTGCAAAAAAGC
TGGTGTCGCTCCGTTAGAGGTGGCTGCTAAAGGACCCAGAGGCGTCAGAGATGATGTTGA
TGTGATCGATAACGGAGACGGAACTCACACGGCAAGATATACCCCATCCACCGAAGGTCT
TTACCAAATGCAGGTGCGATACGACGATCAAGACGTTCCGGAAATGCCGAAGCGAATTCG
TGTGCTTCCTACCCACGAAGCTGACAAGGTTAAGTGTAGCGGTCCTGGAATTGCAAGCAC
CGTGGACGCATCCATGCCGACGGAATTCACTATCGACGCCAAGGAAGCCGGCGACGGTGT
CCTTGCAGTGCAAGTCACGGATCCCGAGGGCTATCCCAAGAAACCGAAAATCGTGGACAA
CGGAGANGGAACATACAAAGTCACTTATTTGCCGGATATGACAGGAAGATATCAAGTGTC
TGTCAAGTATGGCGGTGACGAAGTGCCGTATTCGCCTTTCCGTACAAGGGCAACGCCTGT
TGGCGACGCCAATAAATGNGACGTNTCAGGTGACGGTCTTGGACCCACTGTACCGGTCGG
GAAAGAAAATGTAATTACCGTGGACGCTNGCAAAGCNGGACCCGGCAANGTAACCTGCTC
NGTTACTACTCCTGACGATGGTCTACTGAATGCCGAAGTGGTCGAAAACAAGGACAGGAC
ATACGACGTGTTTTACACACCACCGAAACCAGGACCGTACGCCATCAATTTGAGATATGG
AGGAGAACCAGTCAAGGATAGTCCGTACAACGTGAAGTTGAGTCGTTTTCAATTCGCCAC
CGAGTCAAGTTCAAGAGTAACGGGTTCGAGTTCGAGCCATAGTGTCATAGAGTTCGAGTC
TGGGTCCAAGNTACCGTGTTCACTGTTCCGTATCGAGTTCAAGTCGGGTTCAACTCACTT
CTGTGAAACTCTTGGGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCAC
GCCCGAATTGGTGCAGGAGGAAATGATCGAGGCGGTTGACACCGCCCCGGCGCATGCGTA
CATGGCCGGTCCGGGTGCAGACGAGCTGGTGCAGGCGCTTGATGAGAGCGATATGCTTCG
TGCCGTGGACTTCGTATTTGAGGTCCCGCAAAGACCAGGCGACTTGACAGGTGTGGTGCA
TATGCCATCCGGCCGTACCGGAGAACCAAACATTATTAATAATGGCGACGGAACAATTTC
GATTAGTTACACCCCGACTGAAGCCGGACTTCACGAGATGGACATTCTGTTCGACAAGGA
ACATATACCAGGCAGCCCTGTCCAGTTTTACGTCGATGCTATCGCGCCGGGACACGTCAC
TGCTTTCGGACCAGGTCTAGTTACCGGTAGAGTGGAGAAACCCGCTGAATTTACAGTTGT
AACTAAAGATGCCGGCGCAGGTGGATTAGCACTTGCTATCGAGGGTCCTTCGAAGGCGGA
GATTACCTGCAACGATAACAAAGACGGCACGTGCTCGTTTAGTTATGTCCCGACCGCGGC
CGGTGAATATCAAATCACGATCAAATTTGACGATGAGCATATTCACGGAAGTCCGTTTAC
GGCTAATATCTCAGATGGGTCCACTCCTCGCGCCGCGACTATTGTTCCTGGAACTATGAC
AGATTTCGCTTTGAAAATCAACGAAACCGACCTTACTCAGTTGACGGCGAGCATCGAATC
GCCAAGCGGAAAGAAGGAGGATTGTCAATTGAAACGCTTGCCGAACGGACACATTGGTAT
TTCTTTTACGCCCCACGAAGTCGGAGAGCACCTGGTCAGTGTTAAGAAACGCGGTCGGCA
CGTCGCTAACAGCCCGTTCCGAATCATGGTGAGCGAAGCTGAAATCGGCGACGCCAGCAA
AGTGAAAGTGTACGGGAGTGGCATTGAGAAGGCAAAGGCCGGCGAGCTTGCCGAGTTATA
CGTGGACACCAGGGAAGCAGGTTATGGTGGATTGGGATTGTCAGTTGAAGGTCCGAGCAA
AGTGGATATCGAGTGCCACGACGAAAAGGACGGCGTTTGCAGAGTGACTTACACGCCGCG
CGAACCAGGAGTATACAATGTGAACGTGAAATTCGCGGAAAACCACGTTCCGGGATCTCC
TTTCACTGTCAAATGCACAGGCGAAGGAACACAAACTCAGAGCATTCAGAGAGAGAGAAA
GGCGCCATCCATTGCAACCGTTGGCAGCACTTGCGATTTGAATTTGAAAATCCCGGTGAA
TTATCTGCAGACTTCTTCCTCTGCCACTTCATCTTCCGCATTCCGCCAGTCCTATAGTAT
GACAGAGCACACGAGAATACAGCAGGCCGCGGGCCAGAAGCACATCACGCAGGAAACGTC
CCAGTCGGTTTTGGGACGGGGCAACAAGGCGATGCCGTTCGTGCCGGTCTTTACGCACCG
GTCCGGTCTCGGCGTCTTTCAACATACTGCGAAATTGAAAGAAGCCGACATTCGCGATCT
GTCCGCGTCTGTCATGAGTCCCTCGGGCGAGGTGGAAGAAGCCCAGGTGTACGAGAGCGG
CGACAACACGTACAGCATCCGCTTCGTGCCGAAAGAAATGGGAGTGCACACGGTCAGCGT
GAAGTATCTGGGCGATCACGTACCGGGCAGTCCGTTCCAGTTTACGGTCGGCCCGCTTGG
AGCCGGCGGCGCTGGGAAGGTGACGGCCGGCGGACCGGGGCTGGAGTCTGCCACTGTTAA
CGTGCCAGCTGATTTCAACATTTGGACACGCGAAGCCGGTGCCGGCGGCCTCTCCATCGC
AGTTGAAGGTCCTTCGAAAGCGGAAATAAACTTTGAAGATCGAAAGGACGGATCCTGCGG
AGTTTCCTACATTGCTACCGAACCAGGTGAATATGAAGTATCAGTGAAGTTCAATGACGA
GCATATACCGGGCAGTCCTTTCCCGGTGACGGTTACAGGAAAGAGCGGATCGGTGCCGAG
ATTCCAGCAATCGGACGCCAGTAAAGTGACCTCGTACGGAGGTGGATTGAGGAGAGCCAA
AGTCGGAGAAGACAACACCTTCACCGTGGACTGCAGCAGTGCGGGCTCGAACATGCTTCT
CGTGGGCGTGCACGGCCCGGAGACGCCTTGCGAGGAAGTGTACGTGAAGCACATCGGAGA
CAGGAGATACACGGTCACTTACACGGCCAGGGATGCGGGAGAATACACGCTGATCGTGAA
ATGGGGCGAAGACCACATTCCGGGGTCTCCGTTCTTAGTACGAATCCCATG
| ProSiteProfiles |
Filamin/ABP280_repeat-like (IPR017868) - T[1-45] 19.205 - T[46-141] 30.774 - T[142-237] 32.952 - T[238-333] 28.431 - T[333-412] 20.397 - T[412-504] 30.651 - T[518-591] 20.952 - T[594-686] 33.569 - T[684-782] 26.13 - T[785-877] 32.973 - T[887-981] 31.596 - T[982-1027] 18.075 - T[1028-1123] 30.774 - T[1124-1219] 32.952 - T[1220-1315] 28.431 - T[1315-1394] 20.397 - T[1394-1486] 30.651 - T[1500-1573] 20.952 - T[1576-1668] 33.569 - T[1769-1839] 23.212 - T[1842-1934] 32.973 - T[1944-2038] 31.596 - T[2039-2084] 18.075 - T[2085-2180] 30.774 - T[2181-2276] 32.952 - T[2277-2372] 28.575 - T[2450-2550] 22.164 - T[2550-2642] 30.651 - T[2656-2729] 20.952 - T[2732-2824] 33.569 - T[2925-2995] 23.212 - T[2998-3090] 32.973 - T[3100-3194] 31.596 |
| Gene3D |
Ig-like_fold (IPR013783) - T[1-49] 6.9E-15 - T[50-142] 3.8E-29 - T[143-239] 1.4E-30 - T[240-341] 5.2E-29 - T[342-413] 9.4E-21 - T[414-515] 4.4E-37 - T[521-595] 6.2E-21 - T[596-698] 4.8E-36 - T[702-781] 8.4E-26 - T[782-886] 3.6E-44 - T[887-982] 5.4E-33 - T[983-1031] 7.0E-15 - T[1032-1124] 3.8E-29 - T[1125-1221] 1.4E-30 - T[1222-1325] 5.1E-29 - T[1326-1395] 9.4E-21 - T[1396-1496] 4.5E-37 - T[1503-1577] 6.2E-21 - T[1578-1680] 4.7E-36 - T[1780-1838] 7.1E-24 - T[1839-1942] 3.8E-44 - T[1943-2039] 5.4E-33 - T[2040-2089] 5.3E-15 - T[2090-2181] 3.8E-29 - T[2182-2277] 1.4E-30 - T[2278-2391] 1.2E-28 - T[2477-2551] 9.4E-21 - T[2552-2653] 4.4E-37 - T[2659-2733] 6.2E-21 - T[2734-2836] 4.6E-36 - T[2936-2994] 7.1E-24 - T[2995-3099] 3.5E-44 - T[3100-3195] 5.4E-33 |
| SUPERFAMILY |
Ig_E-set (IPR014756) - T[3-50] 1.47E-12 - T[38-145] 4.78E-27 - T[125-241] 2.14E-29 - T[231-338] 6.21E-24 - T[351-427] 1.4E-15 - T[413-508] 1.8E-27 - T[515-611] 1.0E-19 - T[596-689] 6.14E-29 - T[703-785] 3.67E-21 - T[784-880] 3.54E-29 - T[891-981] 2.74E-25 - T[985-1045] 1.53E-17 - T[1031-1139] 1.27E-27 - T[1107-1221] 3.34E-29 - T[1213-1320] 8.01E-24 - T[1333-1409] 1.33E-15 - T[1395-1490] 1.8E-27 - T[1497-1592] 1.2E-19 - T[1578-1671] 6.14E-29 - T[1775-1859] 2.87E-20 - T[1841-1937] 3.4E-29 - T[1948-2038] 2.67E-25 - T[2041-2102] 1.33E-17 - T[2088-2196] 1.27E-27 - T[2164-2277] 4.4E-29 - T[2270-2371] 6.54E-23 - T[2481-2550] 1.53E-15 - T[2550-2646] 1.53E-27 - T[2653-2749] 1.0E-19 - T[2734-2827] 6.14E-29 - T[2931-3015] 2.2E-20 - T[2999-3093] 6.67E-29 - T[3104-3194] 2.87E-25 |
| Pfam |
Filamin/ABP280_repeat-like (IPR017868) - T[4-42] 1.7E-9 - T[49-137] 2.7E-14 - T[146-234] 3.7E-16 - T[242-330] 4.6E-11 - T[363-408] 3.1E-8 - T[416-501] 9.8E-17 - T[528-588] 2.4E-6 - T[598-683] 3.4E-19 - T[725-779] 1.8E-7 - T[790-873] 4.5E-17 - T[890-977] 2.5E-12 - T[985-1024] 1.3E-9 - T[1031-1119] 2.7E-14 - T[1128-1216] 3.7E-16 - T[1224-1312] 4.6E-11 - T[1345-1390] 3.1E-8 - T[1398-1483] 9.8E-17 - T[1510-1570] 2.4E-6 - T[1580-1665] 3.4E-19 - T[1785-1836] 2.4E-7 - T[1847-1930] 4.5E-17 - T[1947-2034] 2.5E-12 - T[2042-2081] 1.3E-9 - T[2088-2176] 2.7E-14 - T[2185-2273] 3.7E-16 - T[2281-2369] 4.6E-11 - T[2499-2546] 2.2E-8 - T[2554-2639] 9.8E-17 - T[2666-2726] 2.4E-6 - T[2736-2821] 3.4E-19 - T[2941-2992] 2.4E-7 - T[3003-3086] 4.5E-17 - T[3103-3190] 2.5E-12 |
| PANTHER |
FLN_C (IPR032461) - T[5-335] 0.0 - T[338-721] 0.0 - T[723-882] 0.0 - T[882-982] 0.0 - T[987-1317] 0.0 - T[1320-1938] 0.0 - T[1939-2039] 0.0 - T[2044-2375] 0.0 - T[2464-3094] 0.0 - T[3096-3195] 0.0 |
| SMART |
Filamin/ABP280_rpt (IPR001298) - T[50-144] 9.9E-35 - T[146-240] 3.0E-29 - T[242-336] 4.9E-26 - T[338-415] 6.3E-7 - T[416-507] 4.2E-38 - T[509-594] 3.1E-14 - T[598-689] 4.4E-39 - T[697-785] 8.5E-14 - T[789-880] 2.4E-41 - T[891-984] 3.2E-33 - T[1032-1126] 9.9E-35 - T[1128-1222] 3.0E-29 - T[1224-1318] 4.9E-26 - T[1320-1397] 6.3E-7 - T[1398-1489] 4.2E-38 - T[1491-1576] 3.1E-14 - T[1580-1671] 4.4E-39 - T[1762-1842] 3.5E-13 - T[1846-1937] 2.4E-41 - T[1948-2041] 3.2E-33 - T[2089-2183] 9.9E-35 - T[2185-2279] 3.0E-29 - T[2281-2375] 4.5E-23 - T[2454-2553] 4.0E-13 - T[2554-2645] 4.2E-38 - T[2647-2732] 3.1E-14 - T[2736-2827] 4.4E-39 - T[2918-2998] 3.5E-13 - T[3002-3093] 2.4E-41 - T[3104-3195] 1.2E-30 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FLNC_HUMAN | 39.132 % | 1474 | 0 |
| FLNA_HUMAN | 36.027 % | 1185 | 0 |
| FLNB_HUMAN | 35.469 % | 1146 | 0 |