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  1. Transcript 'KH2012:KH.L42.6.v1.A...'
  2. Transcript 'Cisavi.CG.ENS81.R283...'
  3. Transcript 'KH2012:KH.L37.5.v1.A...'
  4. Transcript 'Cisavi.CG.ENS81.R283...'
  5. Transcript 'Boschl.CG.Botznik201...'

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chrUn.g00158.01.t

Possible name(s)

RTL1

Location

chrUn [1,018,882 / 1,021,345]

Sequences

Amino acid sequence

Length: 820

>Boschl.CG.Botznik2013.chrUn.g00158.01.p
MGGIFQYLEQLQRCSKFLEEVEPVGIVLQINEVDLLHPPKYSGSDLLFLYDFKTNSIFLI
DSGSERCFKKVSPDELGKPTVTFRCPNQSRLYGYGAYNLSLTFGSYYTYTLSFEKANVPY
NIIGADFIRHFGWILDMKHRTILDEERDATLTAVSSIESAGLVASITNKCDNDKMAALLS
RYQVLFDSEIDRPPLKGFLFDICLKPDAPVIALPERRIPTKFRDQVRAKLQVWKERGWIV
ESNSPYSSPAHVVAKKNKIDCRICFDYRAINEVTVKNTYPISYLRDFTHQLYGCTIFSTI
DISDGFYIVEMTERASEIAAFAVDSAVYSPKRLAMGLMNSPSFFSFALRQLFHGVKDTFV
FLDDILIGSTNWDSHLHTLTEVFTIMERVGIPINAKKSKFGQESVDFLGHLVNQHGIFPT
ADKTAAIKDFPKPERLRSLRRFCGMAAFYHRLIPRFAEAAQPLYDLITSCTQKDERLVWT
NIADNSFHTLKQLLIDTTAIAHPNKHARLALYTDASLSAMAGALHQYEPDGTLAPLGFFS
KSFKTNQKTFDIFDKELLACKHSVVYFNTFLRGRPFDLFVDSRSLFQTLTSSSNELKLVR
QNRYRAIILDYSPMVHLLPGDENTVADCLSRPEQLIEIMNAQDELPSSDDEQDTPSGPYP
CVNSLIHNHHDVVSTEELAMSQDNDDELKSLLAAPPETSIGLVKRRFDSHHLWCRIVGRT
SIAANVENTIQLQNAVEPTANASGSDIIADSSEQILSERDFEIVQDRNDSNLPCRPAIID
KIITTRTGRATSKPHALKDYVLSAIDCPVTFDGVAVRAPS

Nucleotide sequence

Length: 2,463

>Boschl.CG.Botznik2013.chrUn.g00158.01.t
AATGGGAGGCATATTCCAGTACCTTGAACAACTCCAACGCTGCTCAAAATTTTTAGAGGA
GGTGGAGCCAGTCGGCATCGTCCTGCAAATCAACGAAGTCGACTTACTTCACCCACCCAA
GTACTCAGGCTCTGACCTGTTATTCCTCTATGATTTTAAAACCAATAGCATCTTCCTTAT
TGACTCAGGGAGTGAACGCTGCTTCAAGAAGGTATCACCAGATGAGCTAGGCAAGCCCAC
AGTGACCTTCCGCTGCCCCAACCAATCCAGACTTTACGGATACGGGGCCTACAACCTATC
ATTGACTTTTGGTTCGTACTACACATACACATTATCGTTTGAGAAAGCAAATGTTCCGTA
CAACATCATCGGTGCAGATTTCATTCGACACTTCGGATGGATACTGGATATGAAACACCG
TACAATACTTGACGAGGAACGTGATGCTACACTAACAGCAGTCTCTAGCATAGAATCTGC
AGGTTTAGTTGCGTCCATCACTAACAAATGCGACAATGACAAAATGGCGGCCCTTCTCTC
ACGATATCAAGTGCTATTCGATTCAGAAATAGACCGCCCACCTCTGAAGGGATTTTTATT
TGACATTTGCCTGAAACCTGACGCTCCAGTCATCGCCTTACCTGAACGCAGAATTCCCAC
CAAGTTCAGAGACCAAGTGCGAGCTAAACTACAGGTTTGGAAAGAGAGAGGTTGGATAGT
TGAGAGCAACTCACCTTACTCCAGTCCAGCTCATGTGGTAGCTAAGAAAAACAAAATCGA
CTGCCGCATCTGTTTTGACTACAGAGCGATCAATGAGGTTACGGTGAAAAACACATACCC
AATCAGTTACCTTCGAGACTTCACGCACCAGCTGTACGGCTGTACAATCTTCAGCACGAT
CGACATATCGGATGGGTTCTATATAGTTGAGATGACAGAGAGGGCCTCTGAGATAGCAGC
CTTCGCAGTAGACTCTGCTGTATACAGCCCCAAGCGATTGGCGATGGGCCTCATGAATTC
GCCCAGCTTCTTTTCGTTTGCCTTACGACAGCTCTTCCACGGGGTGAAGGACACATTTGT
CTTCTTGGACGACATCCTGATAGGATCCACTAATTGGGACTCACACTTACACACTTTGAC
AGAGGTCTTCACGATCATGGAGCGCGTTGGGATCCCCATAAATGCGAAGAAGTCGAAATT
CGGACAGGAATCTGTGGATTTCCTTGGCCATTTGGTTAACCAACATGGCATCTTTCCAAC
TGCAGACAAGACAGCTGCAATCAAGGATTTTCCCAAACCAGAACGCCTCAGATCGTTGCG
TCGATTCTGCGGTATGGCGGCGTTCTATCACAGACTAATACCAAGGTTTGCAGAAGCAGC
ACAGCCATTGTATGACCTGATCACATCTTGCACACAGAAAGACGAACGCTTAGTGTGGAC
CAACATAGCAGACAACAGCTTTCACACACTCAAACAACTACTCATCGACACTACAGCGAT
CGCACACCCAAACAAACACGCAAGACTGGCACTCTACACTGACGCATCTCTGTCAGCAAT
GGCAGGAGCGCTGCATCAGTACGAACCAGATGGCACGCTCGCACCCTTGGGATTCTTTTC
GAAGTCATTCAAAACTAATCAGAAGACCTTTGACATCTTTGACAAAGAATTATTGGCATG
CAAGCACTCAGTTGTATATTTCAACACATTTTTACGTGGCAGACCTTTCGACCTCTTCGT
CGATTCGAGGTCTCTGTTTCAGACACTAACATCAAGTTCAAACGAATTGAAACTAGTGAG
ACAGAACAGGTATCGCGCCATCATATTGGATTACTCGCCAATGGTACATCTGTTGCCAGG
GGACGAGAACACAGTTGCTGACTGCTTGTCACGACCGGAACAGTTAATCGAGATAATGAA
CGCACAAGACGAGCTACCTTCCAGCGACGACGAGCAGGATACACCGTCAGGTCCGTACCC
TTGTGTTAATAGCTTGATTCACAACCACCATGACGTAGTTTCGACAGAGGAACTGGCCAT
GTCACAGGACAATGATGATGAGCTGAAATCACTGCTTGCAGCACCCCCAGAGACGTCAAT
AGGACTGGTCAAACGACGATTTGACAGCCATCACCTCTGGTGCAGAATTGTAGGCCGAAC
GAGCATCGCTGCTAACGTTGAAAATACAATTCAGCTTCAGAACGCAGTCGAGCCAACAGC
GAACGCATCCGGTTCAGATATTATTGCAGATTCAAGCGAGCAGATTTTGAGCGAGCGAGA
TTTTGAAATTGTTCAAGACCGTAACGATTCGAATTTACCTTGCAGACCTGCTATTATTGA
TAAAATTATTACGACAAGAACAGGACGTGCAACTTCCAAGCCGCACGCACTCAAGGATTA
TGTTTTATCCGCAATCGATTGTCCTGTCACTTTTGATGGCGTGGCTGTTCGCGCGCCCAG
CTA

InterProScan

ProSiteProfiles
RT_dom (IPR000477) - T[234-412] 12.155
Pfam
RT_dom (IPR000477) - T[255-410] 4.7E-20

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value