- Transcript 'KH2012:KH.C4.584.v1....' >
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- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chrUn.g00253.01.t
Possible name(s)
ZFP36; ZFP36L1; ZFP36L2
Gene model
Location
chrUn [1,645,151 / 1,646,407]
Amino acid sequence
Length: 376
>Boschl.CG.Botznik2013.chrUn.g00253.01.p
MSTLVTGGYTMPERLHKDFSTNLFGQDTSGFSLQALLGMNDNFSPLTNQSMAGIRPMQRP
MNTVRRNSTSSVTSNPSARNRMNMNSLTTMPNTIPETSTATLSAAISSIQTDFRGRAYSE
GASSLSSDSSVQQQQPVASSRYKTELCRPFEENGKCKYGDKCQFAHGKHELRHLARHPKY
KTELCRTFHTSGFCPYGPRCHFIHNQDDSTHRNMGMQMPASGMSQQKPCTHGVPIAVPTP
HVSERNHYNHRPAQLNLLAKQLSNGPNFGSNMGFNGMPPSPPYMDMGNSAVMSPTSPVSG
NNGSAFSFNTAALAGIIMPTDSTFEVLRSQGHFETTVNDDSPFDSLPTPPDSDRESMTGS
PPEKQRLPIFRCLSQS
Nucleotide sequence
Length: 1,131
>Boschl.CG.Botznik2013.chrUn.g00253.01.t
GATGTCGACATTAGTAACAGGAGGGTATACAATGCCTGAACGACTTCACAAAGATTTTTC
GACCAATTTGTTTGGACAAGACACGAGCGGTTTTAGCCTTCAAGCTTTACTCGGGATGAA
CGACAACTTTTCGCCGCTGACGAACCAATCGATGGCCGGCATCAGGCCTATGCAAAGGCC
GATGAACACCGTGCGACGAAACTCTACTTCTTCAGTAACTTCAAACCCCTCAGCCCGAAA
TCGTATGAACATGAACTCGCTAACGACTATGCCCAACACGATTCCAGAAACATCCACTGC
AACCTTGTCAGCTGCTATAAGTTCAATCCAAACGGATTTTCGCGGAAGAGCCTACAGCGA
AGGGGCTAGTTCGTTAAGCTCTGATTCTTCTGTGCAACAACAACAGCCTGTGGCTTCAAG
CAGGTACAAAACTGAATTATGTAGGCCGTTTGAAGAAAATGGAAAGTGCAAATACGGGGA
TAAGTGTCAGTTCGCTCACGGGAAACACGAATTGCGGCATCTGGCGAGACACCCGAAGTA
CAAAACCGAGCTCTGCAGGACTTTTCACACCAGCGGATTCTGTCCGTACGGGCCGAGGTG
TCATTTTATCCACAATCAAGACGACTCTACTCACCGCAATATGGGCATGCAGATGCCGGC
GTCCGGCATGAGCCAGCAGAAGCCTTGCACGCACGGAGTACCGATCGCTGTACCTACCCC
GCACGTATCGGAACGTAATCACTACAACCACAGGCCCGCGCAGCTTAACCTGCTCGCTAA
ACAGCTCAGCAACGGGCCAAACTTCGGATCCAATATGGGATTCAACGGAATGCCGCCATC
GCCGCCGTACATGGACATGGGAAACTCGGCTGTCATGTCTCCGACATCGCCGGTATCAGG
AAACAACGGATCAGCTTTCAGCTTTAATACAGCGGCTCTGGCTGGAATTATTATGCCTAC
CGACAGCACTTTTGAAGTGCTTCGATCTCAGGGACATTTTGAAACCACCGTGAACGACGA
CAGTCCTTTTGACTCACTACCAACACCACCCGACTCGGATAGAGAGTCCATGACTGGCTC
TCCACCCGAAAAGCAACGCCTACCCATTTTCCGTTGCCTTTCTCAGTCATA
| SUPERFAMILY |
Znf_CCCH_sf (IPR036855) - T[140-173] 4.84E-10 - T[176-208] 2.09E-10 |
| SMART |
Znf_CCCH (IPR000571) - T[141-168] 3.1E-9 - T[179-206] 8.3E-9 |
| ProSiteProfiles |
Znf_CCCH (IPR000571) - T[141-169] 17.178 - T[179-207] 15.92 |
| Pfam |
Znf_CCCH (IPR000571) - T[142-168] 5.1E-11 - T[180-206] 7.5E-11 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TISB_HUMAN | 70.37 % | 161 | 1.53E-46 |
| TISD_HUMAN | 60.909 % | 145 | 5.39E-39 |
| TTP_HUMAN | 69.118 % | 113 | 1.59E-28 |