- Transcript 'KH2012:KH.L170.28.v5...' >
- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chrUn.g00313.01.t
Possible name(s)
DDX39B; DDX6; EIF4A3
Gene model
Location
chrUn [1,991,281 / 1,995,850]
Amino acid sequence
Length: 247
>Boschl.CG.Botznik2013.chrUn.g00313.01.p
ADKLLSQDFKRMIAEIVSYLPQSRQILLFSATFPCSVKEFMERYMKKPYEINLMDELTLK
GVTQYYAFLEEKNKVHCLNTLFSKLQINQSIIFCNSTHRVELLAKKITELGYSCFYIHAR
MKQDYRNRVFHDFRQGLCRNLVCSDLFTRGIDIQAVNVVINFDFPKMSETYLHRIGRSGR
YGHLGLAINLITYADRFNLKAIEEELHTDIKPIPPNLPIQISTELQVEVSIYNTCQNDFK
WYQEMNV
Nucleotide sequence
Length: 744
>Boschl.CG.Botznik2013.chrUn.g00313.01.t
CCGACAAATTATTATCTCAAGACTTCAAAAGAATGATCGCGGAAATCGTTTCGTACCTGC
CACAGAGCCGACAGATTCTTTTGTTCTCCGCTACATTCCCCTGTTCCGTGAAAGAATTTA
TGGAACGATACATGAAGAAGCCGTACGAAATCAATTTAATGGACGAGTTGACGTTAAAGG
GTGTGACTCAATATTACGCGTTTCTCGAAGAGAAGAATAAAGTTCATTGCCTTAACACTT
TGTTCTCGAAGGTGCAAATCAACCAGTCGATTATATTTTGCAACTCCACTCACCGAGTCG
AGCTTCTTGCCAAGAAGATTACGGAACTGGGCTACTCGTGCTTCTACATACACGCCAGGA
TGAAGCAGGATTACAGAAATCGCGTCTTCCACGATTTTCGTCAGGGCCTGTGCAGGAACC
TGGTGTGCAGCGATCTGTTTACGCGCGGCATCGACATTCAAGCCGTCAACGTCGTCATCA
ACTTCGATTTTCCGAAGATGTCGGAGACTTACCTTCACCGAATCGGCAGATCCGGTCGAT
ACGGTCACCTCGGTTTGGCTATTAATCTCATCACGTACGCCGACAGATTTAATCTGAAGG
CCATCGAGGAAGAACTGCACACGGACATCAAGCCCATTCCGCCTGATTTACCAATTCAAA
TTTCTACTGAACTACAAGTAGAAGTATCAATCTACAATACCTGTCAAAACGACTTCAAGT
GGTATCAGGAAATGAACGTCTGAA
| ProSiteProfiles |
Helicase_ATP-bd (IPR014001) - T[1-51] 10.949 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[1-52] 3.32E-8 - T[57-215] 1.15E-44 |
| ProSiteProfiles |
Helicase_C (IPR001650) - T[61-221] 22.828 |
| CDD |
Helicase_C (IPR001650) - T[62-190] 4.22777E-38 |
| Pfam |
Helicase_C (IPR001650) - T[75-182] 2.9E-27 |
| SMART |
Helicase_C (IPR001650) - T[101-182] 2.1E-27 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| IF4A3_HUMAN | 38.356 % | 171 | 5.27E-51 |
| IF4A1_HUMAN | 39.269 % | 144 | 6.21E-41 |
| DDX6_HUMAN | 78.341 % | 375 | 5.77E-130 |