- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chrUn.g01483.01.t
Possible name(s)
TUBA1A; TUBA3C; TUBA3D
Gene model
Location
chrUn [9,776,680 / 9,778,507]
Amino acid sequence
Length: 450
>Boschl.CG.Botznik2013.chrUn.g01483.01.p
MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEMVDQVLD
RIRKLSDQCTGLQGFLLFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAVYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIDRPTYTNLNRLIGQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPIISAEKAYHEQLSVSEITNACFEPAN
QMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIAAIKTKRTIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDLAALEKDYEEVGLDSIEGDEEDQEEY
Nucleotide sequence
Length: 1,353
>Boschl.CG.Botznik2013.chrUn.g01483.01.t
AATGCGTGAATGTATCTCGATCCATGTTGGCCAAGCCGGAGTTCAAATCGGTAATGCATG
TTGGGAGCTTTACTGTCTTGAGCATGGAATCCAACCCGACGGTCAAATGCCCAGTGACAA
GACCATTGGAGGCGGAGACGATTCCTTCAACACCTTCTTCAGCGAAACCGGGGCCGGCAA
ACACGTTCCGAGAGCAGTGTTCGTCGATTTAGAGCCCACTGTAGTTGATGAGGTGCGGAC
TGGTACATATCGGCAACTATTCCATCCCGAGCAATTGATCACTGGAAAAGAGGATGCCGC
AAATAATTACGCGAGAGGACACTACACCGTCGGCAAGGAAATGGTGGATCAAGTGCTCGA
CAGAATTCGCAAGCTCTCTGACCAATGTACCGGGCTGCAAGGATTCCTGCTGTTCCACTC
ATTCGGCGGCGGAACCGGATCCGGTTTCGCTTCTCTCTTGATGGAACGACTCTCCGTAGA
CTACGGGAAGAAGTCCAAATTGGAATTCGCCGTTTACCCCGCACCGCAGGTCTCAACAGC
GGTTGTTGAACCCTACAATTCAATCTTGACGACCCACACAACTTTGGAGCACTCCGACTG
CGCATTTATGGTTGACAACGAAGCGATTTACGACATCTGTCGCCGAAACTTGGACATCGA
CCGTCCTACGTACACCAATCTGAACCGTCTGATTGGCCAGATCGTTTCGTCCATCACCGC
TTCGCTACGATTCGACGGAGCCTTGAACGTCGATCTCACCGAATTCCAGACGAATCTCGT
GCCCTACCCTCGTATCCACTTCCCGTTGGTTACGTACGCGCCGATTATCTCGGCCGAGAA
AGCGTATCACGAGCAGTTGTCGGTTTCCGAAATCACCAACGCGTGTTTCGAGCCCGCTAA
CCAGATGGTGAAATGCGATCCTCGTCACGGGAAGTATATGGCGTGCTGTATGCTGTACAG
AGGCGACGTGGTCCCCAAGGACGTTAACGCGGCCATCGCAGCCATTAAAACCAAGCGCAC
AATACAGTTCGTTGACTGGTGCCCGACTGGCTTCAAGGTTGGCATCAACTACCAACCACC
TACCGTTGTTCCCGGTGGCGACTTGGCGAAGGTGCAGAGAGCCGTGTGCATGCTCAGCAA
TACTACCGCTATTGCGGAGGCTTGGGCTCGTCTTGATCACAAGTTCGACCTGATGTACGC
GAAACGGGCTTTTGTTCATTGGTACGTCGGTGAAGGCATGGAAGAGGGAGAGTTCTCGGA
AGCGCGTGAAGATCTTGCGGCTCTCGAGAAAGATTACGAGGAAGTGGGTCTCGACTCTAT
TGAGGGCGATGAAGAAGATCAGGAAGAATATTA
| Gene3D |
Tubulin/FtsZ_GTPase_sf (IPR036525) - T[1-268] 1.2E-132 |
| SUPERFAMILY |
Tubulin/FtsZ_GTPase_sf (IPR036525) - T[1-244] 7.85E-102 |
| PANTHER |
Tubulin (IPR000217) - T[2-447] 0.0 |
| Pfam |
Tubulin_FtsZ_GTPase (IPR003008) - T[3-213] 5.5E-68 |
| PRINTS |
Tubulin (IPR000217) - T[10-30] 2.1E-90 - T[53-72] 2.1E-90 - T[95-106] 2.1E-90 - T[108-132] 2.1E-90 - T[134-152] 2.1E-90 - T[153-174] 2.1E-90 - T[178-191] 2.1E-90 - T[192-212] 2.1E-90 - T[380-408] 2.1E-90 |
| PRINTS |
Alpha_tubulin (IPR002452) - T[18-33] 3.4E-119 - T[45-58] 3.4E-119 - T[88-101] 3.4E-119 - T[120-128] 3.4E-119 - T[148-160] 3.4E-119 - T[161-172] 3.4E-119 - T[214-226] 3.4E-119 - T[274-289] 3.4E-119 - T[321-342] 3.4E-119 - T[347-360] 3.4E-119 - T[360-379] 3.4E-119 - T[385-401] 3.4E-119 - T[422-438] 3.4E-119 |
| SMART |
Tubulin_FtsZ_GTPase (IPR003008) - T[49-246] 4.9E-83 |
| ProSitePatterns |
Tubulin_CS (IPR017975) - T[142-148] . |
| SUPERFAMILY |
Tub_FtsZ_C (IPR008280) - T[246-436] 5.19E-87 |
| SMART |
Tubulin/FtsZ_2-layer-sand-dom (IPR018316) - T[248-393] 5.5E-59 |
| Pfam |
Tubulin/FtsZ_2-layer-sand-dom (IPR018316) - T[263-391] 1.5E-51 |
| Gene3D |
Tubulin/FtsZ_C_sf (IPR037103) - T[269-383] 2.1E-67 |
| Gene3D |
Tubulin_C (IPR023123) - T[384-437] 3.9E-34 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TBA3C_HUMAN | 96.818 % | 880 | 0 |
| TBA3D_HUMAN | 96.818 % | 880 | 0 |
| TBA1C_HUMAN | 93.973 % | 875 | 0 |