Login
Help

TRANSCRIPT CARD

Submit your Data

  1. Clone 'cima8109464' > 
  2. Transcript 'Boschl.CG.Botznik201...'

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chrUn.g01872.01.t

Possible name(s)

ZNF182; ZNF227; ZNF300

Gene model

Boschl.CG.Botznik2013.chrUn.g01872

Location

chrUn [12,178,219 / 12,180,961]

Sequences

Amino acid sequence

Length: 913

>Boschl.CG.Botznik2013.chrUn.g01872.01.p
MVDEAPSQSSNAAQLPKYLDINEKLHTPQTSNGDDNEWALFRDNNGRVVAQIRDLITNED
KYANQPREPCHDDAKRKKPELVLVVSTDMPDENCGDNFDINEPELNSDNDELFPYDDNML
IAERGIEVMNDHTYESEFFPCVRKQWYIRPPVSEGMLTDSNMIVNTSILANDVRIFLKNN
SISIENFAKVYMKRTQGTVSDLLNHPKKWQELSKKGRDTYIKLMEFLSDTKLASSIKELR
SKHAFTCPDRLPVSLLDQIKRGSSPSDKELSNIAVVYRLKVDTLKRYCQHHVSLQRNSNL
TSYGQHEEHISDILGQYICGRPGCGTILQEKEALKLHLDKNCENQFYCLLCQQYFKTQLS
FDAHFEHCHKPFMVSKQPPSLTVPDVIPDNDLIFVGDNADAKSQKFICGVCWCGFKSRQR
LTKHLSIKHKVGQKNLRPGITCFVCFKVLKNLNALDVHMRTHTKARPFPCGTCNAAFQTK
ANLQRHIKTHTGEKPYACTYCESRFIEEKALTIHMRTHTGEKPFQCDVCNKRFIHKTPLK
LHMLIHEGKKPHACEFCGKLFRQKINLRVHMKRHRGTKKYKCASCELSFITKTDWNRHNM
KHTGEKPFQCHLCLKSFTRNVYLQDHLKRLSNQTAPQCDICEKRFCNDAAFKRHRKTHVL
TLPSSNTADQKLAKDSVSMDTYNGGEIGTANSNIFLLSTKSNVGNDRQYFVMPIQSMESN
ADDDINRLSLQPVLLSQNEDSYSLPFTTSDGQPLLLQCVDLSGTPQSLFGQNGEFLSTLK
DVAIPITFSTEESTSQGLPPILETIDPNMQSTVNKIVDDTIILNEEANGNTSDDTMKLDL
SGNAQILVSGSQQVSRATVMGIPSNHEAGNNLVSQNQIPVGVSDVILPHDPEVSTQVSRN
QHLEPYIIVESKM

Nucleotide sequence

Length: 2,742

>Boschl.CG.Botznik2013.chrUn.g01872.01.t
AATGGTAGATGAAGCACCGTCTCAATCAAGCAATGCCGCCCAACTGCCCAAGTATTTGGA
CATAAACGAAAAACTACACACTCCACAAACCAGCAATGGTGATGATAACGAATGGGCCTT
GTTCCGGGATAATAATGGCCGCGTTGTTGCACAAATACGGGATCTAATAACCAATGAGGA
TAAATACGCGAATCAGCCACGCGAACCGTGTCATGATGATGCAAAGCGTAAGAAACCAGA
GCTGGTGCTTGTGGTATCGACTGATATGCCGGATGAAAACTGTGGAGATAATTTTGACAT
TAACGAACCCGAGTTGAACTCTGACAATGATGAACTTTTCCCGTACGATGACAACATGCT
GATTGCAGAAAGGGGGATTGAAGTAATGAACGATCACACATATGAGTCTGAATTTTTTCC
TTGTGTCAGAAAGCAATGGTACATTCGACCGCCAGTCAGTGAGGGCATGTTAACTGACAG
TAATATGATCGTGAACACATCAATTCTTGCGAATGACGTTCGTATTTTTCTGAAAAACAA
CTCGATTTCCATCGAGAATTTCGCGAAGGTTTACATGAAACGAACGCAAGGCACTGTGAG
CGACTTGTTGAATCATCCCAAAAAATGGCAGGAATTATCAAAAAAAGGACGAGATACTTA
TATCAAGCTGATGGAGTTTCTTTCAGACACGAAACTTGCGAGCAGCATCAAAGAACTACG
TTCAAAGCACGCATTTACTTGCCCGGACAGGCTGCCTGTGTCTTTACTAGACCAGATTAA
ACGCGGATCTTCACCGTCGGACAAAGAGCTATCGAATATCGCAGTCGTTTACAGACTTAA
AGTGGACACGTTGAAACGATATTGCCAACATCACGTTTCATTGCAGAGAAACTCAAATTT
AACATCGTACGGTCAACACGAAGAGCATATTTCGGATATCCTCGGTCAGTATATCTGCGG
TAGGCCCGGATGTGGCACCATACTACAAGAAAAAGAAGCTTTGAAATTACATTTGGACAA
AAACTGTGAAAACCAATTTTATTGCTTGTTATGTCAGCAGTATTTCAAAACTCAACTGTC
TTTTGACGCTCATTTTGAACACTGCCACAAACCATTCATGGTGTCCAAGCAACCTCCATC
TTTAACAGTACCTGATGTAATTCCGGACAATGACTTGATTTTTGTGGGCGACAACGCAGA
CGCAAAGTCCCAGAAATTTATCTGCGGGGTTTGCTGGTGTGGTTTCAAATCCCGACAGCG
TTTGACTAAACATTTGTCCATCAAGCATAAAGTCGGGCAGAAAAATTTGCGTCCGGGCAT
CACGTGTTTCGTGTGCTTCAAGGTGCTCAAAAACTTGAACGCGTTAGATGTACACATGAG
AACGCACACAAAAGCCAGGCCTTTTCCTTGCGGCACATGCAACGCCGCGTTTCAAACAAA
AGCCAACCTGCAAAGGCATATCAAAACGCATACCGGTGAAAAACCATACGCCTGCACTTA
TTGCGAATCTAGATTTATCGAAGAAAAAGCATTGACCATCCACATGCGCACACACACGGG
AGAAAAACCATTTCAATGCGACGTCTGTAATAAACGTTTCATACACAAGACTCCTCTCAA
GTTGCACATGTTAATACACGAAGGTAAGAAGCCTCACGCTTGCGAATTTTGCGGCAAACT
ATTCCGGCAGAAAATTAACTTGAGAGTGCACATGAAGCGTCATCGCGGCACGAAAAAGTA
TAAATGCGCATCCTGCGAATTGTCATTTATAACTAAAACTGATTGGAATCGACATAACAT
GAAACACACCGGAGAAAAACCGTTTCAATGTCACTTATGCCTCAAATCGTTTACGAGAAA
TGTTTATCTTCAAGATCACTTGAAAAGACTATCGAATCAAACTGCGCCTCAGTGCGATAT
CTGTGAAAAAAGATTTTGCAATGACGCAGCATTCAAGCGACACAGGAAGACTCATGTTTT
AACGTTGCCTTCATCAAATACGGCAGATCAAAAGTTAGCGAAAGATTCTGTAAGTATGGA
TACATACAACGGCGGTGAAATTGGAACTGCAAATTCAAACATATTTCTTCTGTCTACCAA
ATCCAACGTTGGCAATGACAGACAATATTTTGTCATGCCAATACAATCTATGGAAAGTAA
CGCCGATGATGATATAAATCGGTTGTCACTTCAACCAGTTTTACTCTCTCAAAATGAAGA
CAGTTATAGTTTACCGTTCACGACATCAGACGGACAACCATTGCTTTTACAATGCGTGGA
TTTATCTGGAACTCCACAGTCTTTATTCGGTCAAAATGGAGAATTCTTGTCAACTTTGAA
AGATGTCGCGATACCGATTACATTTTCTACCGAAGAGTCTACAAGCCAGGGACTTCCGCC
TATTTTAGAGACGATCGATCCAAACATGCAGTCTACTGTGAATAAAATTGTGGATGACAC
AATCATCCTCAATGAGGAGGCGAATGGAAATACATCAGACGATACAATGAAATTAGATCT
ATCGGGTAACGCGCAAATCCTAGTGTCTGGATCTCAACAAGTCAGCCGCGCCACGGTGAT
GGGGATACCTTCGAATCACGAGGCTGGGAATAATTTGGTGAGCCAAAATCAGATACCGGT
CGGCGTTAGTGACGTGATTCTGCCGCACGACCCCGAGGTTTCGACGCAAGTTTCAAGGAA
TCAGCATTTGGAGCCTTATATAATCGTGGAGTCAAAAATGTG

InterProScan

ProSiteProfiles
CUT_dom (IPR003350) - T[155-242] 21.797
SMART
CUT_dom (IPR003350) - T[155-238] 4.6E-21
SUPERFAMILY
Lambda_DNA-bd_dom_sf (IPR010982) - T[159-232] 8.84E-20
Pfam
CUT_dom (IPR003350) - T[164-231] 4.3E-20
SMART
Znf_C2H2_type (IPR013087) - T[317-339] 250.0 - T[346-369] 18.0 - T[406-429] 0.39 - T[440-462] 0.12 - T[468-490] 0.0017 - T[496-518] 0.0046 - T[524-546] 0.0016 - T[552-574] 9.2E-4 - T[580-602] 0.74 - T[608-628] 24.0 - T[636-658] 0.057
ProSitePatterns
Znf_C2H2_type (IPR013087) - T[348-369] . - T[408-429] . - T[442-462] . - T[470-490] . - T[498-518] . - T[526-546] . - T[554-574] . - T[582-602] . - T[638-658] .
ProSiteProfiles
Znf_C2H2_type (IPR013087) - T[440-467] 10.596 - T[468-495] 15.563 - T[496-523] 14.877 - T[524-551] 14.066 - T[552-579] 12.84 - T[580-607] 13.069 - T[608-636] 9.743 - T[636-663] 9.993
SUPERFAMILY
Znf_C2H2_sf (IPR036236) - T[453-505] 3.1E-17 - T[505-561] 1.59E-19 - T[561-617] 9.04E-15 - T[602-654] 2.27E-10

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
ZN300_HUMAN 36.559 % 191 1.09E-51
ZN227_HUMAN 32.653 % 192 4.8E-51
ZN182_HUMAN 33.623 % 191 3.12E-51