Aniseed - Transcript Card

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chrUn.g02116.01.t

Possible name(s)

IDH3A; IDH3B; IDH3G

Gene model

Boschl.CG.Botznik2013.chrUn.g02116

Location

chrUn [13,748,961 / 13,750,092]

Sequences

Amino acid sequence

Length: 376

>Boschl.CG.Botznik2013.chrUn.g02116.01.p
MALRIGNMLRISNGVPKNLILTQATRSIQVSANAHSDQKVNVTMIPGDGVGPELMSAVKT
VFKAAAFPVKFEEFWLSEIQDHNSEDVMQEASDSILKNNVALTGDISSRLSAMHGELAST
KFLLRQKLDLFANVVRVKSFDGYQTRHNNLDLVIIREQTEGEYSSLEHESVPGVVESLKI
VTRKKSKRIAKFAFDYATKHGRKCVTAVHKANIMKLGDGMFLESCQEVAKLYPKIKFESM
IVDNTCMQLVSKPHQFDVMVTPNLYGNIIDNLAAGLVGGAGLVPGESYSKDCVMFETGAR
HPFAQAVGRNIANPTAMLLASANMLHHLHFVKEGDLLSKAVTKVVNDGKTRTADLGGYAT
TTQFTHAVIDEMSRLQ

Nucleotide sequence

Length: 1,131

>Boschl.CG.Botznik2013.chrUn.g02116.01.t
TGGCTTTGAGGATCGGGAATATGTTGCGTATCAGTAACGGTGTTCCAAAAAACTTGATAC
TGACTCAAGCGACACGGTCTATTCAAGTCAGCGCAAATGCTCATTCGGATCAGAAAGTCA
ACGTGACTATGATACCGGGAGACGGTGTCGGACCAGAATTGATGTCGGCCGTGAAAACTG
TGTTCAAAGCGGCCGCTTTCCCTGTTAAATTTGAGGAATTTTGGCTGAGCGAAATACAGG
ACCACAACTCTGAAGACGTAATGCAGGAAGCTTCCGACTCGATATTGAAGAACAACGTCG
CATTGACGGGAGATATTTCTTCGCGTTTGAGCGCCATGCATGGAGAATTAGCGTCTACGA
AGTTTTTGTTAAGGCAAAAATTGGATTTATTTGCCAATGTTGTTAGAGTGAAAAGTTTCG
ACGGATATCAGACCCGGCATAATAATTTGGATCTCGTAATCATCCGCGAGCAGACGGAGG
GAGAATACAGCTCTTTGGAGCATGAAAGCGTGCCGGGAGTTGTTGAATCGTTAAAGATTG
TAACTCGCAAAAAATCGAAGAGAATCGCAAAGTTTGCGTTTGATTATGCAACAAAGCACG
GCCGTAAATGTGTCACCGCGGTTCACAAAGCGAACATTATGAAATTGGGTGACGGAATGT
TTTTGGAATCGTGTCAAGAAGTAGCGAAATTGTACCCGAAAATCAAATTCGAATCTATGA
TAGTGGATAACACTTGCATGCAGCTGGTGTCGAAACCGCATCAGTTTGACGTGATGGTGA
CGCCTAATTTGTACGGCAACATCATCGATAATTTAGCTGCAGGCCTAGTTGGCGGGGCTG
GTTTAGTACCAGGGGAAAGTTATTCAAAAGATTGTGTCATGTTTGAAACGGGGGCTCGTC
ATCCCTTTGCGCAAGCCGTAGGTCGAAATATCGCGAATCCGACCGCGATGCTGTTGGCTT
CGGCTAACATGCTGCACCATTTGCATTTTGTGAAGGAAGGGGATTTACTTTCGAAAGCAG
TAACGAAAGTGGTTAACGATGGTAAAACTCGTACTGCCGACTTAGGAGGGTATGCCACTA
CCACACAGTTTACGCACGCGGTTATTGATGAAATGTCACGTTTGCAGTAAC

InterProScan

TIGRFAM	Isocitrate_DH_NAD (IPR004434) - T[38-372] 5.2E-148
Pfam	IsoPropMal-DH-like_dom (IPR024084) - T[41-370] 6.8E-75
SMART	IsoPropMal-DH-like_dom (IPR024084) - T[41-368] 2.0E-136
ProSitePatterns	IsoCit/isopropylmalate_DH_CS (IPR019818) - T[263-282] .

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
IDH3G_HUMAN	52.101 %	345	3.75E-117
IDH3B_HUMAN	69.184 %	461	7.92E-163
IDH3A_HUMAN	42.388 %	281	1.04E-92