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  1. Transcript 'Boschl.CG.Botznik201...'

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chrUn.g02522.01.t

Possible name(s)

CIRBP; TRA2A; TRA2B

Gene model

Boschl.CG.Botznik2013.chrUn.g02522

Location

chrUn [16,494,256 / 16,495,305]

Sequences

Amino acid sequence

Length: 151

>Boschl.CG.Botznik2013.chrUn.g02522.01.p
MPRKSPRFTRHTLHTGVQRLCHSHQIVNSQTGRSRGFGFVYFENGDSAEEAKDRANGMEL
DGRRIRVDFSITKRAHTPTPGVYVGRPTGPPRGGRTYERYGDRDRDRYSRRDDYRRDDYR
RDYGRRSPSPYSRRRSPSPYYRDRSPYRSRY

Nucleotide sequence

Length: 456

>Boschl.CG.Botznik2013.chrUn.g02522.01.t
TGCCACGAAAAAGTCCTAGGTTCACGCGGCATACATTGCATACCGGAGTTCAGCGCCTAT
GCCACAGCCATCAAATTGTTAATTCGCAGACTGGTCGATCTCGAGGATTTGGATTTGTCT
ACTTCGAAAACGGAGATAGTGCAGAAGAAGCCAAGGACCGAGCAAACGGGATGGAACTAG
ACGGAAGGCGAATCAGGGTGGATTTTTCAATCACGAAAAGAGCGCACACGCCTACACCCG
GTGTCTACGTAGGCAGACCTACGGGACCACCGCGAGGTGGCCGGACTTACGAGCGATACG
GGGACCGAGACCGCGACCGGTACAGCAGACGCGATGACTACAGACGCGACGACTATCGCA
GGGACTATGGCAGAAGAAGCCCCTCTCCGTATTCTCGACGACGATCACCCAGCCCTTACT
ACAGGGACCGTTCCCCTTACCGCAGTCGTTATTAAT

InterProScan

SMART
RRM_dom (IPR000504) - T[5-68] 0.0022
Gene3D
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[14-136] 9.9E-15
Pfam
RRM_dom (IPR000504) - T[25-66] 3.6E-11
ProSiteProfiles
RRM_dom (IPR000504) - T[25-72] 11.401
SUPERFAMILY
RBD_domain_sf (IPR035979) - T[26-101] 1.49E-18

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
TRA2B_HUMAN 68.539 % 108 2.32E-29
TRA2A_HUMAN 69.565 % 102 2.01E-27





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