- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chrUn.g02574.01.t
Possible name(s)
TBX2; TBX3; TBX5
Gene model
Location
chrUn [16,794,742 / 16,795,268]
Amino acid sequence
Length: 105
>Boschl.CG.Botznik2013.chrUn.g02574.01.p
MKIPGHDKDASYCVMMDIVNVDDHRYKFQHGEWTIAGRGEPHLPQRFFLHPDSPAIGAKW
MSEVVSFHKVKLTNSIGRDVDGKVSRVQNSVTLEYRKLALTLLLR
Nucleotide sequence
Length: 318
>Boschl.CG.Botznik2013.chrUn.g02574.01.t
TGAAAATACCAGGACACGATAAGGATGCCTCCTACTGCGTGATGATGGACATAGTCAATG
TAGACGACCATCGATACAAGTTTCAGGATGGCGAATGGACAATAGCAGGTCGCGGAGAGC
CTCACTTACCGCAACGATTCTTTCTGCATCCGGACTCACCCGCCATCGGTGCTAAGTGGA
TGAGCGAGGTTGTATCATTCCATAAAGTGAAATTGACCAATTCTATCGGAAGAGACGTGG
ACGGAAAAGTAAGCCGAGTTCAGAATTCTGTTACTTTGGAATATAGGAAGCTCGCACTGA
CTCTATTGCTCCGTTAAC
| SMART |
TF_T-box (IPR001699) - T[1-105] 4.1E-8 |
| ProSiteProfiles |
TF_T-box (IPR001699) - T[1-105] 28.415 |
| Gene3D |
T-box_sf (IPR036960) - T[1-97] 3.2E-28 |
| PANTHER |
TF_T-box (IPR001699) - T[2-84] 4.0E-46 |
| Pfam |
TF_T-box (IPR001699) - T[2-80] 1.4E-23 |
| SUPERFAMILY |
p53-like_TF_DNA-bd (IPR008967) - T[2-78] 3.73E-25 |
| PRINTS |
TF_T-box (IPR001699) - T[48-61] 6.1E-7 - T[65-74] 6.1E-7 |
| ProSitePatterns |
TF_T-box_CS (IPR018186) - T[49-67] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TBX2_HUMAN | 51.316 % | 100 | 5.53E-26 |
| TBX3_HUMAN | 52.632 % | 103 | 5.08E-27 |
| TBX5_HUMAN | 50.667 % | 93.6 | 8.53E-24 |