- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chrUn.g02746.01.t
Possible name(s)
ACTB; ACTC1; ACTG1
Gene model
Location
chrUn [17,800,986 / 17,802,398]
Amino acid sequence
Length: 332
>Boschl.CG.Botznik2013.chrUn.g02746.01.p
MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPC
LLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVFDSGDGVSHTV
PIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDF
EQEMQTAASSSTLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETTYNSIM
KCDVDIRKDLYANTVLSGGSTMYPGIADRMQKEISVLAPPTMKIKIIAPPERKYSVWIGG
SILASLSTFQQMWISKQEYDESGPSIVHRKCF
Nucleotide sequence
Length: 999
>Boschl.CG.Botznik2013.chrUn.g02746.01.t
TGGTCGGTATGGGACAAAAAGACTCGTACGTCGGAGACGAGGCCCAGAGCAAAAGAGGAA
TCCTGACTTTAAAATACCCCATCGAACACGGAATCGTTACGAACTGGGATGACATGGAGA
AGATCTGGCATCACACTTTCTACAACGAACTGCGAGTCGCTCCAGAAGAACACCCGTGTC
TGCTGACGGAGGCTCCACTCAACCCGAAGGCTAATCGTGAAAAGATGACCCAAATCATGT
TCGAAACCTTCAATTCTCCCGCTATGTACGTCGCGATCCAGGCCGTTCTGTCGCTGTACG
CATCCGGACGTACCACAGGTATCGTATTCGACAGTGGTGATGGCGTATCTCACACCGTCC
CTATCTACGAAGGATACGCGCTTCCTCACGCCATCTTGCGTCTGGATTTGGCCGGGCGAG
ACTTGACCGATTACTTGATGAAGATTCTGACCGAAAGAGGATATTCCTTCACCACCACAG
GTGAGCGAGAAATTGTCCGTGACATCAAGGAAAAGCTCTGCTACGTCGCGCTCGACTTCG
AACAAGAGATGCAAACCGCTGCCTCAAGCAGCACCCTAGAGAAGTCCTACGAACTTCCCG
ATGGACAGGTGATCACTGTCGGAAACGAACGTTTCCGATGTCCTGAAGCACTTTTCCAAC
CTTCCTTTCTGGGGATGGAATCTGCAGGAATTCACGAGACCACCTACAACTCGATCATGA
AGTGTGACGTCGATATTCGTAAAGATTTGTACGCCAATACCGTTCTTTCCGGAGGATCGA
CTATGTATCCAGGAATCGCTGACAGGATGCAGAAAGAAATCTCCGTCCTTGCCCCGCCTA
CGATGAAGATCAAAATCATCGCGCCCCCAGAAAGGAAATATTCCGTTTGGATCGGTGGCT
CCATCCTCGCTTCTCTGTCCACTTTCCAACAGATGTGGATCTCCAAACAAGAATACGACG
AGTCCGGCCCCTCCATTGTGCACAGGAAGTGCTTCTAAT
| PANTHER |
Actin (IPR004000) - T[1-331] 1.4E-237 |
| SMART |
Actin (IPR004000) - T[1-332] 1.1E-195 |
| PRINTS |
Actin (IPR004000) - T[6-17] 7.4E-51 - T[18-40] 7.4E-51 - T[72-85] 7.4E-51 - T[97-116] 7.4E-51 - T[193-209] 7.4E-51 |
| Pfam |
Actin (IPR004000) - T[7-332] 2.2E-131 |
| ProSitePatterns |
Actin_CS (IPR004001) - T[10-20] . - T[313-321] . |
| ProSitePatterns |
Actin/actin-like_CS (IPR020902) - T[61-73] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ACTG_HUMAN | 96.084 % | 674 | 0 |
| ACTB_HUMAN | 96.084 % | 674 | 0 |
| ACTC_HUMAN | 93.675 % | 662 | 0 |