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  1. Transcript 'KH2012:KH.C4.516.v3....'
  2. Transcript 'KH2012:KH.C9.853.v1....'
  3. Transcript 'KH2012:KH.C8.445.v2....'
  4. Transcript 'Phmamm.CG.MTP2014.S4...'
  5. Transcript 'Boschl.CG.Botznik201...'

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chrUn.g02747.01.t

Possible name(s)

ACTB; ACTG1; ACTG2

Location

chrUn [17,803,066 / 17,806,464]

Sequences

Amino acid sequence

Length: 538

>Boschl.CG.Botznik2013.chrUn.g02747.01.p
MCDDESAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
TQIMFETFNPAMYVAIQAVLSLYASGRTTGIVFDSGDGVSHTVPIYEGYALPHAILRLDL
AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTAASSSTLEKSY
ELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLS
GGSTMYPAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPI
EHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPA
MYVAIQAVLSLYASGRTTGIVFDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMK
ILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTAASSSSIEKSYELPDGQVAR

Nucleotide sequence

Length: 1,617

>Boschl.CG.Botznik2013.chrUn.g02747.01.t
TGTGTGACGACGAATCCGCTGCTCTGGTTGTTGATAATGGATCCGGTATGTGCAAAGCCG
GATTTGCCGGAGACGACGCTCCCCGTGCCGTTTTCCCGTCCATTGTCGGACGCCCAAGAC
ATCAGGGTGTCATGGTCGGTATGGGACAAAAAGACTCGTACGTCGGAGACGAAGCCCAGA
GCAAGAGAGGAATCCTGACTTTGAAATACCCCATCGAACACGGAATCGTTACAAACTGGG
ACGACATGGAGAAGATCTGGCATCACACTTTCTACAACGAACTCCGTGTCGCCCCAGAAG
AACACCCGGTCCTCCTCACAGAAGCTCCACTCAACCCGAAGGCTAACCGCGAAAAGATGA
CGCAAATCATGTTCGAAACCTTCAACCCCGCCATGTACGTCGCGATCCAGGCCGTTCTGT
CGCTGTACGCGTCCGGACGTACCACTGGTATCGTATTCGACAGTGGTGATGGCGTATCTC
ACACCGTCCCTATCTACGAAGGATACGCGCTTCCTCACGCCATCTTGCGTCTGGATTTGG
CCGGACGAGACTTGACCGATTACTTGATGAAGATCTTGACGGAACGAGGATATTCCTTCA
CCACCACAGGCGAGAGGGAAATTGTCCGTGACATCAAGGAAAAGCTCTGCTACGTCGCCC
TCGACTTCGAACAAGAAATGCAAACCGCTGCCTCAAGCAGCACCCTAGAGAAGTCCTACG
AACTTCCTGATGGACAGGTGATCACTGTCGGAAACGAACGATTCCGATGCCCTGAAGCAC
TTTTCCAACCTTCCTTCCTCGGAATGGAGTCTGCCGGAATTCACGAGACTACCTACAACT
CGATCATGAAGTGTGATGTCGATATTCGTAAAGATTTGTACGCCAATACCGTTCTGTCCG
GAGGATCGACTATGTATCCAGGCGGATTTGCCGGAGACGACGCCCCTCGTGCCGTTTTCC
CGTCCATTGTCGGACGTCCAAGACATCAGGGTGTCATGGTCGGTATGGGACAAAAAGACT
CGTACGTCGGAGACGAAGCCCAGAGCAAGAGAGGAATCCTGACTTTGAAATATCCCATCG
AACACGGAATCGTCACGAACTGGGACGACATGGAGAAGATCTGGCATCACACTTTCTACA
ACGAACTCCGCGTCGCCCCAGAAGAACACCCGGTCCTCCTCACAGAAGCTCCACTCAACC
CGAAGGCTAACCGTGAAAAGATGACCCAAATCATGTTTGAAACCTTCAACACCCCCGCCA
TGTACGTCGCGATCCAGGCCGTTCTGTCGCTGTACGCGTCCGGACGTACCACCGGTATCG
TATTCGACAGCGGTGATGGCGTATCCCACACTGTCCCAATCTACGAAGGGTACGCGCTTC
CTCACGCTATCTTGCGTCTGGATTTGGCCGGACGAGACTTGACCGATTACTTAATGAAGA
TCTTGACGGAAAGAGGATATTCCTTCACCACCACAGGCGAGAGAGAAATTGTCCGTGACA
TCAAGGAAAAGCTCTGCTACGTCGCCCTCGACTTCGAACAAGAAATGCAAACTGCTGCTT
CAAGCAGCAGCATTGAGAAATCCTACGAGCTTCCCGACGGACAGGTAGCACGCTAAG

InterProScan

PANTHER
Actin (IPR004000) - T[2-307] 0.0 - T[308-536] 0.0
Pfam
Actin (IPR004000) - T[4-307] 3.8E-110 - T[308-536] 7.9E-80
SMART
Actin (IPR004000) - T[6-307] 8.9E-157 - T[308-538] 5.5E-74
PRINTS
Actin (IPR004000) - T[27-36] 1.2E-56 - T[50-61] 1.2E-56 - T[62-84] 1.2E-56 - T[116-129] 1.2E-56 - T[140-159] 1.2E-56 - T[236-252] 1.2E-56
ProSitePatterns
Actin_CS (IPR004001) - T[54-64] . - T[342-352] .
ProSitePatterns
Actin/actin-like_CS (IPR020902) - T[105-117] . - T[393-405] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
ACTG_HUMAN 95.44 % 617 0
ACTB_HUMAN 96.091 % 619 0
ACTH_HUMAN 91.909 % 608 0