- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chrUn.g03048.01.t
Possible name(s)
FOXF1; FOXF2; FOXL1
Gene model
Location
chrUn [19,548,691 / 19,549,879]
Amino acid sequence
Length: 395
>Boschl.CG.Botznik2013.chrUn.g03048.01.p
MLPQRQQSSPSSDTQPLPETPTDDTNINNNSNKIHDATVDESHNQESAGTGASVNGSETS
TSTEEDGSDGGAAVSTKKGTGAHRRPEKPPYSYIALIVMAIQSSATKKLTLSEIYHFLQT
RFEFFRGSYQGWKNSVRHNLSLNECFIKLPKGLGRPGKGHYWTIDPASEFMFEEGSFRRR
PRGFRRKCQALKPYGLFGGPASLVSHQGYPSHDMFGHTGPLHHGSMPPPRHQPGLLGFDP
QGMNFLNGAAAAAAAANGMANPSSPNHPANSKVPGTPQTPPAVNPHYPTNTHCPNSAIDA
RTTQISPSSAAGMAVHNHPYSASMFNWSSASSHVAGGYMRHGPGNPVSPADHQVPIMNGM
PPPGSRMDYHSLYAQARENHLPYDGKWSFVIEHVD
Nucleotide sequence
Length: 1,188
>Boschl.CG.Botznik2013.chrUn.g03048.01.t
GATGCTGCCGCAGCGACAGCAAAGCTCCCCGAGTTCAGACACTCAACCTCTACCAGAAAC
CCCAACAGACGACACAAACATCAATAACAATAGCAACAAAATACACGATGCCACGGTGGA
CGAATCGCACAATCAGGAAAGCGCAGGAACCGGCGCTTCGGTCAACGGTTCGGAGACATC
CACCTCTACGGAAGAAGACGGTAGTGACGGAGGCGCTGCAGTGTCTACGAAGAAAGGCAC
AGGCGCTCATAGACGCCCGGAAAAACCGCCGTATTCCTACATCGCTTTGATAGTGATGGC
TATCCAAAGCTCGGCCACGAAAAAACTGACCCTCAGCGAGATCTACCATTTCTTACAGAC
CCGGTTCGAGTTTTTCCGAGGCTCTTACCAAGGCTGGAAGAATTCGGTGAGGCACAATCT
CTCTCTTAACGAGTGTTTTATCAAACTCCCGAAAGGCCTAGGCCGACCCGGCAAGGGACA
TTACTGGACTATCGACCCGGCCAGCGAATTCATGTTTGAAGAAGGGTCCTTTCGACGACG
CCCGCGCGGTTTTAGACGTAAGTGTCAAGCTTTAAAGCCGTACGGACTCTTCGGCGGTCC
TGCTTCATTAGTATCCCATCAAGGCTACCCTTCTCATGATATGTTCGGCCACACCGGCCC
GCTTCACCACGGCTCCATGCCACCACCTAGACACCAGCCAGGTCTTTTAGGTTTTGACCC
TCAAGGTATGAACTTTTTGAATGGGGCTGCCGCTGCAGCAGCTGCTGCCAACGGTATGGC
AAACCCCTCATCACCGAATCATCCCGCGAACTCAAAAGTTCCCGGAACGCCCCAAACACC
TCCCGCAGTCAACCCGCATTATCCCACAAACACTCATTGCCCGAATTCCGCCATCGACGC
GCGCACCACGCAGATTTCTCCGTCTTCAGCGGCTGGTATGGCAGTTCACAATCATCCTTA
TTCAGCGTCCATGTTTAATTGGTCGAGTGCGAGCTCTCACGTTGCCGGGGGATACATGCG
CCACGGCCCGGGGAACCCGGTTTCGCCGGCCGACCATCAGGTTCCAATCATGAACGGGAT
GCCGCCGCCCGGATCGAGAATGGATTATCATTCACTGTACGCGCAGGCCCGCGAAAATCA
TCTGCCTTATGACGGTAAGTGGAGTTTTGTAATTGAGCATGTTGATTA
| Gene3D |
WH-like_DNA-bd_sf (IPR036388) - T[74-182] 1.0E-41 |
| SMART |
Fork_head_dom (IPR001766) - T[86-176] 6.3E-56 |
| SUPERFAMILY |
WH_DNA-bd_sf (IPR036390) - T[87-181] 2.09E-36 |
| Pfam |
Fork_head_dom (IPR001766) - T[88-172] 1.4E-35 |
| ProSiteProfiles |
Fork_head_dom (IPR001766) - T[88-182] 36.948 |
| ProSitePatterns |
TF_fork_head_CS_1 (IPR018122) - T[88-101] . |
| PRINTS |
Fork_head_dom (IPR001766) - T[88-101] 2.2E-20 - T[109-126] 2.2E-20 - T[132-149] 2.2E-20 |
| CDD |
Fork_head_dom (IPR001766) - T[88-165] 8.9714E-48 |
| ProSitePatterns |
TF_fork_head_CS_2 (IPR030456) - T[132-138] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FOXL1_HUMAN | 57.282 % | 138 | 2.25E-37 |
| FOXF1_HUMAN | 87.2 % | 206 | 5.73E-63 |
| FOXF2_HUMAN | 93.636 % | 200 | 4.52E-60 |