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  1. Transcript 'Boschl.CG.Botznik201...'

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chrUn.g03807.01.t

Possible name(s)

NCBP3; RPAP2

Location

chrUn [24,676,554 / 24,677,871]

Sequences

Amino acid sequence

Length: 438

>Boschl.CG.Botznik2013.chrUn.g03807.01.p
MKSGRPNVVKELEQRKQREREAHALVVTLVDNSVSKDFFLNSLKQLTVQHYEDVTVERSL
AGLCGYCLCNKSLNAVPQQKYKIVKNRVYDISARKLFCSSRCYAASCKISEQISSVPLWL
RETETMPDIEIFDDTAKVGDEVILRNKISKADITQLEQDFDGKAKTKDDDAMKNTKDLNE
SEKLPEHSTGQVQSIIGESLMSTPSSDAGLPAVSPLDELRNILNQWICQDSYDYLYGRQK
TENLETSVAAGDVEEILLNKTEFEGIEAKDGTQTDIGLERSMKKYERIVEDAKKYQNKVS
GFFGGAIEIKERQTTAVTNDGQQVCDSEIRVFREKLVLDKLKKFIDDLTPPLPSVYPELR
YLVGTLNLSSKNVMARTELWPMLTLSILYLLTVKVTPLDKILSSREIARVLQIVLKVFNV
DASSLKENAFQILSKFDK

Nucleotide sequence

Length: 1,317

>Boschl.CG.Botznik2013.chrUn.g03807.01.t
TGAAATCTGGTAGACCCAACGTAGTGAAAGAGTTGGAACAGAGGAAGCAGCGGGAAAGAG
AAGCTCATGCCCTGGTTGTGACTTTAGTAGACAATTCAGTGTCGAAAGATTTTTTTCTGA
ATTCCCTCAAGCAACTTACTGTCCAGCACTACGAAGACGTGACGGTCGAACGCTCGTTGG
CAGGCCTATGTGGATATTGTTTATGCAACAAGAGCTTGAATGCAGTACCTCAACAAAAAT
ACAAGATCGTCAAGAATCGCGTTTACGATATATCTGCTCGAAAATTGTTTTGCAGCAGTC
GTTGCTACGCTGCTTCCTGTAAAATATCGGAACAGATATCGTCGGTTCCTCTTTGGTTGA
GGGAGACCGAGACAATGCCTGACATAGAAATTTTTGATGATACAGCCAAAGTGGGAGATG
AGGTAATATTACGGAATAAAATCTCAAAAGCAGATATCACACAACTCGAACAGGATTTCG
ATGGGAAAGCAAAGACAAAGGATGATGATGCAATGAAAAACACTAAAGATTTGAATGAAA
GTGAAAAATTACCCGAGCACTCTACTGGCCAAGTACAATCGATCATCGGTGAATCTTTAA
TGAGTACTCCTTCCTCGGACGCTGGCTTACCTGCGGTATCACCGCTAGACGAACTTCGAA
ATATTCTGAATCAATGGATTTGCCAGGACAGTTATGATTATCTCTACGGGCGCCAAAAAA
CTGAAAATCTTGAAACTTCAGTCGCAGCAGGTGATGTGGAAGAAATTTTATTGAATAAAA
CAGAATTCGAAGGAATTGAAGCAAAAGACGGCACACAAACGGATATTGGGCTTGAAAGAT
CCATGAAAAAGTATGAACGCATTGTAGAAGACGCAAAAAAATACCAAAACAAGGTGTCAG
GCTTTTTTGGTGGTGCTATAGAAATCAAGGAGCGACAAACAACTGCCGTTACAAACGATG
GACAGCAAGTGTGCGACTCTGAGATTCGTGTTTTTCGAGAGAAACTTGTGTTAGACAAAT
TGAAGAAGTTTATAGATGATTTGACCCCGCCACTTCCGAGCGTTTATCCGGAGCTGAGAT
ATCTCGTAGGGACTCTGAATTTGTCAAGCAAAAATGTCATGGCGAGAACTGAATTATGGC
CAATGTTAACTTTATCGATATTATATCTTTTAACTGTGAAAGTCACCCCATTGGATAAGA
TTCTCAGTTCCAGAGAGATTGCAAGGGTTTTACAGATAGTGTTGAAAGTCTTCAATGTGG
ACGCTTCCAGTTTGAAAGAAAATGCATTTCAGATTCTATCAAAATTTGATAAGTAGG

InterProScan

Gene3D
Rtr1/RPAP2_sf (IPR038534) - T[5-160] 7.1E-27
ProSiteProfiles
Rtr1/RPAP2 (IPR007308) - T[41-122] 19.419
Pfam
Rtr1/RPAP2 (IPR007308) - T[46-113] 2.2E-16

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RPAP2_HUMAN 42.857 % 114 3.13E-27