Aniseed - Transcript Card

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chrUn.g03889.01.t

Possible name(s)

POU4F1; POU4F2; POU4F3

Gene model

Boschl.CG.Botznik2013.chrUn.g03889

Location

chrUn [25,191,516 / 25,192,681]

Sequences

Amino acid sequence

Length: 158

>Boschl.CG.Botznik2013.chrUn.g03889.01.p
MYNKQHASFSVGCSSTSITHADIPPGDLTAEPRELEAFAERFESLTLSHNNMVALKPILT
TWLELAEEEYRRKMEQSGLAEKKRKRTSIAAPEKRSLEAYFLVQPRPSSEKIAAIAEKLD
LKKNVVRVWFCNQRQKQKRMKFSAFNGVIITTQLPMWS

Nucleotide sequence

Length: 477

>Boschl.CG.Botznik2013.chrUn.g03889.01.t
TGTATAACAAGCAACACGCGTCGTTTTCAGTCGGCTGTTCGTCAACATCGATAACACACG
CAGACATTCCGCCCGGCGACTTAACCGCGGAGCCCAGAGAATTGGAAGCGTTCGCGGAAA
GGTTTGAGTCGTTAACACTAAGCCACAATAATATGGTCGCTCTAAAGCCAATTCTAACGA
CATGGTTGGAACTGGCAGAAGAGGAATATCGAAGGAAAATGGAACAATCTGGATTGGCCG
AGAAAAAGCGTAAAAGAACATCAATTGCAGCGCCAGAAAAGCGATCTCTTGAAGCGTACT
TTTTGGTACAGGCGAGACCGTCTTCTGAGAAAATTGCGGCCATCGCGGAAAAGCTGGACT
TGAAGAAAAACGTCGTCAGAGTATGGTTTTGTAACCAAAGGCAAAAGCAAAAGCGGATGA
AATTCTCTGCGTTCAACGGGGTTATTATTACAACACAGTTGCCAATGTGGTCTTAGA

InterProScan

ProSiteProfiles	POU_dom (IPR000327) - T[1-67] 10.956
SMART	POU_dom (IPR000327) - T[27-67] 0.0012
PRINTS	POU (IPR013847) - T[35-48] 2.0E-19 - T[51-66] 2.0E-19 - T[81-101] 2.0E-19 - T[116-131] 2.0E-19
Pfam	POU_dom (IPR000327) - T[40-67] 1.2E-7
SUPERFAMILY	Homeobox-like_sf (IPR009057) - T[77-140] 3.76E-16
ProSiteProfiles	Homeobox_dom (IPR001356) - T[80-140] 16.779
SMART	Homeobox_dom (IPR001356) - T[82-144] 3.0E-17
Pfam	Homeobox_dom (IPR001356) - T[83-139] 2.8E-17
CDD	Homeobox_dom (IPR001356) - T[83-141] 2.41656E-14
ProSitePatterns	Homeobox_CS (IPR017970) - T[115-138] .

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
PO4F2_HUMAN	62.025 %	182	6.03E-57
PO4F3_HUMAN	54.645 %	179	1.35E-56
PO4F1_HUMAN	63.291 %	179	2.51E-55