Aniseed - Transcript Card

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chrUn.g03927.01.t

Possible name(s)

OSR1; OSR2; ZEB2

Gene model

Boschl.CG.Botznik2013.chrUn.g03927

Location

chrUn [25,444,371 / 25,445,604]

Sequences

Amino acid sequence

Length: 410

>Boschl.CG.Botznik2013.chrUn.g03927.01.p
MSSTCSAAGKLESPSLGTTITELLRNTDPSPDACKSEQCVINYRGSFETLNWTVPLPQAG
RDTATESAHKHSIATNFDVPLKMAASFTVPGYGGLTTSTWQGDALKNKDLETRLVQSELA
RSKIFQLTNSLYSSYGEAMRELMARTSLPLTNMEVERAASAAAAAAMHFGNPFRTLPLSP
KPFPFPSFGHNLFPMAVNGLPGLSSVNHGVSSTAAVATREDTDRNSPVEDMSPGIVNQGR
LSEGNDSPIIPSSCFPFMSQANFERFLNQSTYSISTSSPPKYLSNTPPVRIPFLSPSYPG
LMGFPLRKFAPSLLNTPALPQPAAKFEDAGVNNVTPATSNISPRRRDKIGGRGNTRPKKR
YICKYCEREFTKSYNLLIHERTHTDERPYRCEICNKAFRRQDHLRDHRYD

Nucleotide sequence

Length: 1,233

>Boschl.CG.Botznik2013.chrUn.g03927.01.t
AATGTCATCCACCTGTTCCGCAGCGGGAAAACTAGAGTCTCCATCGTTAGGAACTACAAT
TACTGAATTGCTTCGGAACACAGATCCCTCACCCGACGCTTGCAAAAGCGAACAGTGTGT
TATCAATTATCGCGGTTCGTTCGAAACACTAAACTGGACGGTACCTTTACCGCAGGCTGG
CAGAGATACCGCTACGGAATCCGCACACAAACACAGTATTGCAACAAACTTTGATGTGCC
GTTGAAAATGGCAGCAAGCTTCACTGTGCCAGGCTACGGAGGACTAACTACCTCAACATG
GCAAGGTGATGCATTGAAAAATAAAGACCTAGAAACTCGTCTTGTCCAATCGGAATTGGC
GAGATCAAAGATATTCCAATTGACGAACTCTTTATACTCTTCCTACGGTGAAGCCATGAG
GGAATTGATGGCACGGACGTCCTTACCACTCACAAACATGGAAGTGGAAAGAGCAGCAAG
TGCAGCCGCTGCTGCGGCCATGCACTTCGGGAACCCATTCAGAACACTGCCTTTATCGCC
CAAGCCCTTTCCTTTCCCGAGTTTCGGACATAATTTATTCCCGATGGCTGTTAACGGTCT
ACCGGGGTTATCATCCGTAAATCACGGCGTATCGAGCACAGCGGCAGTGGCGACACGAGA
AGACACAGATCGAAATTCGCCAGTCGAAGACATGTCTCCAGGAATAGTAAATCAAGGACG
ATTATCAGAAGGCAACGATTCGCCTATAATACCATCAAGTTGCTTTCCGTTTATGTCACA
GGCAAACTTCGAACGATTTTTAAACCAGTCGACGTATTCTATCTCAACTTCATCGCCACC
AAAATATTTATCAAACACTCCCCCGGTTCGGATCCCATTCCTGTCTCCGTCATATCCCGG
TTTAATGGGCTTCCCGCTGCGGAAATTCGCCCCCAGTTTACTAAACACGCCGGCTTTACC
GCAGCCTGCGGCAAAATTTGAAGACGCAGGAGTAAATAACGTTACTCCAGCCACGTCTAA
CATCAGCCCCAGACGACGGGACAAAATTGGAGGACGTGGAAACACGCGCCCGAAGAAACG
GTACATTTGCAAATATTGCGAAAGAGAATTCACAAAGTCGTACAATCTACTCATACACGA
AAGAACGCACACTGATGAGAGACCGTACCGATGCGAGATTTGCAATAAGGCATTCCGAAG
GCAAGATCATTTGAGAGATCACAGGTATGATTG

InterProScan

SUPERFAMILY	Znf_C2H2_sf (IPR036236) - T[357-407] 2.5E-15
SMART	Znf_C2H2_type (IPR013087) - T[361-383] 0.017 - T[389-409] 6.5
ProSiteProfiles	Znf_C2H2_type (IPR013087) - T[361-388] 14.918 - T[389-410] 10.305
ProSitePatterns	Znf_C2H2_type (IPR013087) - T[363-383] .

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
OSR1_HUMAN	65.278 %	109	2.1E-27
OSR2_HUMAN	62.5 %	109	4.9E-27