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  1. Clone 'cien231178' > 
  2. Transcript 'Boschl.CG.Botznik201...'

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chrUn.g04510.01.t

Possible name(s)

ACTA2; ACTB; ACTG1

Gene model

Boschl.CG.Botznik2013.chrUn.g04510

Location

chrUn [29,626,024 / 29,627,356]

Sequences

Amino acid sequence

Length: 374

>Boschl.CG.Botznik2013.chrUn.g04510.01.p
MDDEAALVVDNGSGMCKAGFAGDDAPRAVFPSIIGRPRHTGVMVGMGQKDSYVGDEAQSK
RGILSLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPCLLTEAPLNPKANREKMTQ
IMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVSHTVPIYEGYALPHAIIRLDLA
GRDLTDYLIKILTERGCSLTTTAEREIARDIKEKLGYVALDFDEEMNTAASSSTIEKSYE
LPDGHMITIGNERFRCPETLFAPSFIGRECVGIDEATYNSIMKCDVDIRKDLYANTVLSG
GTTMFRGIADRMQKGIRELAPATMKIKIIAPPERKYSVWIGGSILASLSTFQELWISKEE
YDESGPAIVHRKCF

Nucleotide sequence

Length: 1,125

>Boschl.CG.Botznik2013.chrUn.g04510.01.t
AATGGACGACGAAGCTGCGCTCGTTGTTGACAATGGTTCTGGAATGTGCAAGGCTGGATT
CGCAGGCGATGATGCACCACGGGCAGTATTTCCTTCAATCATTGGAAGGCCTCGTCACAC
GGGCGTGATGGTTGGTATGGGACAGAAAGACAGCTACGTTGGTGATGAAGCTCAGAGTAA
AAGGGGTATATTGTCATTGAAATACCCGATTGAACACGGCATTGTCACAAACTGGGATGA
CATGGAGAAGATCTGGCATCATACATTCTACAACGAACTCCGCGTCGCGCCAGAAGAGCA
TCCGTGTCTACTAACCGAAGCTCCTCTCAACCCAAAAGCGAATCGCGAAAAGATGACTCA
GATTATGTTCGAGACGTTCAACTCGCCAGCAATGTACGTTGCCATTCAAGCAGTCTTGTC
ACTGTATGCTTCAGGACGTACTACTGGTATCGTGATGGATTCTGGTGATGGTGTTTCGCA
TACAGTACCGATCTATGAGGGATACGCTCTACCACATGCGATTATTCGTCTCGATCTCGC
TGGCCGTGATCTGACAGATTACCTCATAAAGATTTTGACCGAAAGAGGATGTTCTCTAAC
GACAACAGCTGAGCGGGAAATCGCCCGTGACATCAAGGAAAAATTGGGCTATGTTGCTCT
TGATTTCGACGAAGAAATGAATACGGCTGCTTCCAGTAGTACCATTGAGAAATCCTATGA
GCTTCCTGACGGCCATATGATCACTATAGGAAATGAGCGTTTCAGGTGTCCAGAAACCCT
CTTCGCGCCATCTTTCATTGGTCGAGAATGCGTCGGCATTGATGAAGCGACGTACAACTC
TATCATGAAGTGCGACGTCGATATCCGTAAGGACTTGTACGCAAACACTGTCCTATCTGG
TGGCACCACTATGTTCCGCGGAATTGCTGATCGAATGCAGAAAGGCATTAGGGAACTGGC
CCCGGCGACAATGAAAATCAAAATCATCGCTCCTCCCGAGAGGAAGTACTCTGTGTGGAT
TGGTGGGTCCATTCTAGCTTCGTTGTCAACATTCCAGGAGCTGTGGATCTCAAAAGAGGA
ATACGATGAATCAGGCCCGGCAATTGTGCACAGGAAATGCTTTTA

InterProScan

Pfam
Actin (IPR004000) - T[2-374] 9.8E-141
PANTHER
Actin (IPR004000) - T[2-373] 4.2E-247
SMART
Actin (IPR004000) - T[4-374] 1.4E-226
PRINTS
Actin (IPR004000) - T[25-34] 7.0E-56 - T[48-59] 7.0E-56 - T[60-82] 7.0E-56 - T[114-127] 7.0E-56 - T[139-158] 7.0E-56 - T[235-251] 7.0E-56
ProSitePatterns
Actin_CS (IPR004001) - T[52-62] . - T[355-363] .
ProSitePatterns
Actin/actin-like_CS (IPR020902) - T[103-115] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
ACTG_HUMAN 88.8 % 701 0
ACTB_HUMAN 89.544 % 704 0
ACTA_HUMAN 87.131 % 690 0