- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chrUn.g04788.01.t
Possible name(s)
PTPRC; PTPRE; PTPRS
Gene model
Location
chrUn [31,489,763 / 31,493,924]
Amino acid sequence
Length: 146
>Boschl.CG.Botznik2013.chrUn.g04788.01.p
MRHQSRWNSCILQTIRHYQYLHWESDQAPDQPDLLLDLIQLLIKQSSKDGATVLVHCTNG
LGRTGVFIALANIITRLQHENRIDIVRTVKDLKDIRPGIIQTLSDYKCCYEMVKRVSMQE
NVYENNTFVEDPTKTEDPIYANLNGT
Nucleotide sequence
Length: 441
>Boschl.CG.Botznik2013.chrUn.g04788.01.t
TGCGACACCAGAGTCGATGGAATTCTTGCATTTTGCAGACGATCAGACACTATCAATATT
TACATTGGGAAAGTGACCAAGCTCCCGACCAACCTGATCTGCTGCTGGATCTTATTCAAC
TCCTCATCAAGCAAAGCTCCAAGGATGGAGCAACAGTATTGGTGCATTGCACGAACGGTT
TGGGTAGAACGGGTGTTTTCATTGCACTTGCGAACATCATCACAAGACTGCAGCATGAAA
ATCGAATTGACATCGTACGCACCGTCAAGGATCTCAAGGATATTCGACCCGGAATCATTC
AGACTCTGGGCGACTACAAGTGTTGTTATGAAATGGTGAAGCGAGTTTCAATGCAAGAGA
ATGTATATGAAAATAATACATTCGTGGAGGATCCTACCAAAACTGAAGACCCAATCTATG
CAAACTTGAACGGCACGTAGA
| ProSiteProfiles |
PTPase_domain (IPR000242) - T[1-116] 17.436 |
| Gene3D |
Prot-tyrosine_phosphatase-like (IPR029021) - T[2-129] 4.1E-31 |
| PRINTS |
PTPase_domain (IPR000242) - T[13-30] 4.1E-13 - T[52-70] 4.1E-13 - T[83-98] 4.1E-13 - T[99-109] 4.1E-13 |
| SUPERFAMILY |
Prot-tyrosine_phosphatase-like (IPR029021) - T[13-114] 3.93E-30 |
| Pfam |
PTPase_domain (IPR000242) - T[13-113] 1.3E-25 |
| SMART |
Tyr_Pase_cat (IPR003595) - T[14-115] 4.2E-23 |
| ProSiteProfiles |
TYR_PHOSPHATASE_dom (IPR000387) - T[33-107] 19.14 |
| ProSitePatterns |
Tyr_Pase_AS (IPR016130) - T[55-65] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| PTPRS_HUMAN | 37.255 % | 80.9 | 1.34E-18 |
| PTPRE_HUMAN | 36.538 % | 83.2 | 1.85E-19 |
| PTPRC_HUMAN | 31.884 % | 81.3 | 8.59E-19 |