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TRANSCRIPT CARD

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  1. Transcript 'Boschl.CG.Botznik201...'

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chrUn.g04788.01.t

Possible name(s)

PTPRC; PTPRE; PTPRS

Location

chrUn [31,489,763 / 31,493,924]

Sequences

Amino acid sequence

Length: 146

>Boschl.CG.Botznik2013.chrUn.g04788.01.p
MRHQSRWNSCILQTIRHYQYLHWESDQAPDQPDLLLDLIQLLIKQSSKDGATVLVHCTNG
LGRTGVFIALANIITRLQHENRIDIVRTVKDLKDIRPGIIQTLSDYKCCYEMVKRVSMQE
NVYENNTFVEDPTKTEDPIYANLNGT

Nucleotide sequence

Length: 441

>Boschl.CG.Botznik2013.chrUn.g04788.01.t
TGCGACACCAGAGTCGATGGAATTCTTGCATTTTGCAGACGATCAGACACTATCAATATT
TACATTGGGAAAGTGACCAAGCTCCCGACCAACCTGATCTGCTGCTGGATCTTATTCAAC
TCCTCATCAAGCAAAGCTCCAAGGATGGAGCAACAGTATTGGTGCATTGCACGAACGGTT
TGGGTAGAACGGGTGTTTTCATTGCACTTGCGAACATCATCACAAGACTGCAGCATGAAA
ATCGAATTGACATCGTACGCACCGTCAAGGATCTCAAGGATATTCGACCCGGAATCATTC
AGACTCTGGGCGACTACAAGTGTTGTTATGAAATGGTGAAGCGAGTTTCAATGCAAGAGA
ATGTATATGAAAATAATACATTCGTGGAGGATCCTACCAAAACTGAAGACCCAATCTATG
CAAACTTGAACGGCACGTAGA

InterProScan

ProSiteProfiles
PTPase_domain (IPR000242) - T[1-116] 17.436
Gene3D
Prot-tyrosine_phosphatase-like (IPR029021) - T[2-129] 4.1E-31
PRINTS
PTPase_domain (IPR000242) - T[13-30] 4.1E-13 - T[52-70] 4.1E-13 - T[83-98] 4.1E-13 - T[99-109] 4.1E-13
SUPERFAMILY
Prot-tyrosine_phosphatase-like (IPR029021) - T[13-114] 3.93E-30
Pfam
PTPase_domain (IPR000242) - T[13-113] 1.3E-25
SMART
Tyr_Pase_cat (IPR003595) - T[14-115] 4.2E-23
ProSiteProfiles
TYR_PHOSPHATASE_dom (IPR000387) - T[33-107] 19.14
ProSitePatterns
Tyr_Pase_AS (IPR016130) - T[55-65] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
PTPRS_HUMAN 37.255 % 80.9 1.34E-18
PTPRE_HUMAN 36.538 % 83.2 1.85E-19
PTPRC_HUMAN 31.884 % 81.3 8.59E-19