- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chrUn.g05409.01.t
Possible name(s)
SF3B4; TIAL1; TRNAU1AP
Gene model
Location
chrUn [36,104,318 / 36,108,142]
Amino acid sequence
Length: 163
>Boschl.CG.Botznik2013.chrUn.g05409.01.p
MDESFVTYVFQNISSQLVSVKTIKRRDTGLPAGYCFVEFRTEDEAERVLKTINGKDIPGT
NPTRRFRLNRAQGGKNWDIGPSFSIFVGDLDPIITDDKLEDFFLKKYRSVKGGKVMYDDH
GDSRGYGFVRFSDETEQKRALIEMQGAAGLGGRPIKVSQATPK
Nucleotide sequence
Length: 491
>Boschl.CG.Botznik2013.chrUn.g05409.01.t
CATGGATGAATCCTTCGTCACTTACGTTTTCCAAAACATAAGCAGTCAATTGGTATCTGT
GAAAACCATAAAAAGACGAGACACTGGACTTCCAGCCGGTTATTGCTTCGTTGAATTCAG
GACCGAGGATGAAGCGGAAAGGGTGTTGAAAACTATAAATGGAAAAGACATACCGGGAAC
AAATCCGACGAGAAGATTCAGACTGAACAGGGCGCAGGGCGGAAAGAACTGGGATATCGG
CCCATCGTTTTCGATATTTGTCGGCGATCTGGACCCGATCATCACTGACGATAAGCTGGA
GGACTTCTTTCTCAAGAAATATCGAAGCGTGAAGGGCGGCAAAGTCATGTACGATGACCA
TGGCGATTCGAGAGGATACGGTTTTGTGAGATTTAGCGACGAGACGGAACAGAAGAGAGC
GCTCATCGAAATGCAAGGGGCTGCTGGGCTCGGTGGCAGGCCAATCAAAGTGAGCCAGGC
GACCCCGAAAA
| Gene3D |
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[1-72] 2.3E-16 - T[82-159] 9.6E-22 |
| SMART |
RRM_dom (IPR000504) - T[1-65] 1.2 - T[84-158] 6.8E-15 |
| ProSiteProfiles |
RRM_dom (IPR000504) - T[1-73] 10.991 - T[83-162] 16.875 |
| SUPERFAMILY |
RBD_domain_sf (IPR035979) - T[3-163] 2.99E-29 |
| Pfam |
RRM_dom (IPR000504) - T[17-61] 3.3E-8 - T[85-156] 4.7E-15 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TSAP1_HUMAN | 53.374 % | 184 | 9.04E-59 |