Aniseed - Transcript Card

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chrUn.g05711.01.t

Possible name(s)

NCOR1; NCOR2

Gene model

Boschl.CG.Botznik2013.chrUn.g05711

Location

chrUn [37,935,305 / 37,940,677]

Sequences

Amino acid sequence

Length: 410

>Boschl.CG.Botznik2013.chrUn.g05711.01.p
MQRGSNPHVGGMSAQPNPHLVYLTPHHQSPGYGGQGSVGGAHHGSRDFHNPHIQHGDLQP
GAIGTHQQLHPAGMGRRRTSGRLSLLRDIGVAGERDRAESSINSSIAHGYDNPAGLSQIN
ATPMVYGGRPAMTMMSSMVGLPHMQKPNSAGPPQPPSSNQHRVMSAPTGQHSRPSAIHPY
HAASGTFLLPGPTTIESEPVSESTIKEELKPSSHTMGSHYSNQLMHSSQFTGMQVQSQAG
GAGKSESAETETMPSKDSLLQAMEKVDKEIQKVTNEVKSLERKQQHLQETAKKPHQTERT
ESPKKVDTKHKDLWQVIYAENRRKAEAAKGIFDSMAPRYDMPLYNQPSDTKVYHENLKKN
EEMRPKLLAYFQRRRQLSNVRERYLCARYDLLMGEWQKRTARMEDNVKRK

Nucleotide sequence

Length: 1,233

>Boschl.CG.Botznik2013.chrUn.g05711.01.t
AATGCAAAGGGGCAGTAATCCGCATGTCGGCGGGATGAGTGCCCAACCCAACCCACACCT
GGTATATTTAACGCCACATCATCAATCTCCTGGATACGGAGGGCAAGGTTCGGTGGGTGG
CGCGCATCATGGTAGTCGCGATTTCCATAATCCACACATTCAGCATGGAGATCTCCAACC
TGGCGCCATTGGGACCCATCAACAGCTGCACCCGGCTGGTATGGGGCGGAGAAGGACTTC
TGGACGTCTTTCATTATTACGGGATATTGGTGTTGCTGGAGAGAGAGATAGAGCTGAGTC
TTCAATAAACTCAAGTATTGCTCATGGTTATGATAATCCAGCTGGCTTGTCCCAAATCAA
TGCGACTCCCATGGTTTACGGAGGCAGACCCGCGATGACTATGATGAGCTCCATGGTCGG
GCTTCCGCACATGCAAAAACCAAATTCTGCTGGACCCCCTCAGCCACCATCCAGTAACCA
GCACCGGGTCATGTCCGCGCCGACAGGCCAACACTCGAGGCCTTCCGCAATTCACCCATA
CCATGCAGCTTCTGGGACTTTCTTATTACCGGGGCCGACAACAATTGAATCGGAGCCTGT
TAGTGAGAGCACAATTAAGGAGGAGCTAAAACCATCGTCACACACTATGGGATCACATTA
TTCAAATCAACTGATGCATTCGTCTCAGTTTACTGGAATGCAAGTCCAAAGTCAAGCAGG
CGGTGCGGGCAAGTCAGAATCAGCAGAGACGGAGACAATGCCGTCCAAAGATTCTTTGCT
GCAGGCCATGGAGAAAGTGGACAAAGAAATACAGAAGGTGACCAACGAGGTGAAGTCGTT
GGAGCGAAAGCAACAACATCTTCAAGAAACGGCCAAGAAGCCTCATCAAACCGAGAGGAC
GGAATCTCCCAAGAAGGTCGACACCAAGCATAAAGATTTGTGGCAAGTGATATATGCGGA
AAATAGGCGCAAGGCAGAAGCGGCGAAAGGAATTTTCGACTCTATGGCACCTCGCTACGA
CATGCCTCTTTACAACCAGCCCAGCGACACGAAAGTGTATCACGAAAACTTGAAAAGAAA
CGAGGAAATGCGCCCGAAATTGTTGGCGTACTTCCAGCGACGCCGGCAACTGTCCAACGT
ACGGGAACGTTATCTCTGCGCCAGATACGATCTGCTGATGGGCGAATGGCAGAAAAGGAC
CGCGAGAATGGAAGATAACGTCAAACGGAAGTA

InterProScan

Pfam	N-CoR_GPS2_interact (IPR031557) - T[245-315] 4.0E-15

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
NCOR1_HUMAN	50 %	160	5.92E-43
NCOR2_HUMAN	46.667 %	167	3.34E-45