- Transcript 'Phmamm.CG.MTP2014.S3...' >
- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chrUn.g05728.01.t
Possible name(s)
FNTA; PTAR1; RABGGTA
Gene model
Location
chrUn [38,022,721 / 38,024,389]
Amino acid sequence
Length: 555
>Boschl.CG.Botznik2013.chrUn.g05728.01.p
MHGRIKVKTTAEQDEERRKEQERKLKLFQKASSIAFYKIGNKEYDDAGLKVTAELLYKNS
DISSLWNYRKRAILAMKDEFAENHQKLCENELELLVACLRNNPKSYGCWHHRCFIMLTMP
TPTWEDELKLCNQFLQFDDRNFHCWDYRRFVVKHSVPEVPIDEELRVTNHLIENNFSNYS
SWHYRSKLLPKRFPSLKYSEQIEEGKLLEELEYVQNAFFTDPNDQSAWFYHQWLVGRREE
NQKLISAHFNRESNTVTCVFRKPSSRNSVESNCSISVGSTIAKGIWKPVFDGFVKYCHAW
LFKLSDDVPIEDFSIRLDCFDVEVGLDVGSQFMFSNASFSTNDEFRQTLGETKSALLKTE
LDSCIELNELEPGNKWIVLTLVQLMNIIDPDKYREDINKYVSELKSIDSSRRNYFGDLRS
KIVIEQNISAGKLENGNVNLSDFGITRMYHVQYFSCVRILDLSKNSLTSLCGPLYLLQCC
ERFWADDNEIDDVTGICDMPSLSLLSLKGNRLVDVGRLKTIASCHVLKTLDIRQNPFECS
EADVKRLMPDVKVSV
Nucleotide sequence
Length: 1,668
>Boschl.CG.Botznik2013.chrUn.g05728.01.t
CATGCACGGTAGAATTAAAGTAAAGACTACTGCAGAACAGGACGAGGAGAGACGCAAGGA
ACAAGAAAGAAAGTTGAAGCTTTTCCAGAAAGCATCTAGTATTGCGTTTTACAAGATCGG
AAATAAAGAATATGACGATGCCGGCTTGAAAGTTACCGCTGAGCTACTATACAAAAATTC
AGACATATCATCATTGTGGAATTACAGAAAACGCGCAATACTTGCCATGAAGGATGAATT
CGCAGAAAATCATCAAAAATTATGTGAAAACGAGTTGGAACTATTGGTGGCATGCCTGAG
AAATAACCCAAAGTCTTATGGTTGCTGGCATCACAGATGTTTCATTATGCTCACCATGCC
AACCCCAACGTGGGAAGATGAATTGAAATTATGCAACCAGTTCCTGCAGTTTGACGATAG
GAATTTCCACTGTTGGGACTACAGACGATTTGTGGTGAAGCATTCGGTTCCTGAAGTACC
GATCGATGAAGAGCTCAGAGTGACAAATCATTTAATAGAAAATAACTTCTCGAATTACTC
GTCGTGGCATTATCGTAGCAAGCTACTGCCCAAACGTTTTCCAAGCTTGAAATATTCCGA
ACAAATCGAAGAAGGGAAGTTATTAGAGGAATTGGAGTACGTTCAAAATGCATTTTTTAC
CGACCCCAATGATCAAAGTGCATGGTTTTACCATCAATGGTTGGTTGGGCGTAGGGAAGA
GAACCAAAAATTGATTTCGGCGCATTTCAATCGTGAATCTAACACAGTGACTTGCGTTTT
CAGGAAGCCATCTTCGCGAAATTCAGTTGAATCCAACTGCAGTATAAGTGTTGGAAGTAC
TATTGCGAAAGGTATATGGAAACCTGTTTTCGACGGATTTGTGAAATATTGTCATGCTTG
GCTTTTCAAGTTATCCGACGATGTACCGATAGAAGATTTTTCTATTAGACTCGATTGTTT
CGACGTTGAAGTGGGGCTTGATGTAGGCTCTCAATTTATGTTCTCAAATGCATCCTTTTC
CACAAACGATGAATTCCGTCAGACCCTGGGCGAAACAAAATCGGCGCTCCTTAAAACGGA
ATTAGACTCTTGTATTGAATTGAACGAATTGGAACCGGGTAACAAGTGGATTGTCCTCAC
GTTGGTACAACTGATGAATATCATCGATCCTGACAAGTACCGAGAAGATATCAACAAGTA
CGTTTCCGAATTAAAAAGCATCGATTCGTCCAGAAGAAATTATTTTGGCGACTTGAGAAG
CAAGATTGTGATCGAACAAAATATTTCAGCGGGCAAGCTCGAGAATGGTAACGTGAATTT
ATCCGATTTTGGTATCACGCGGATGTACCATGTGCAGTATTTTTCATGTGTAAGAATCCT
GGACTTGTCCAAAAACAGTTTGACATCCCTGTGTGGTCCGTTGTATCTTTTACAGTGTTG
TGAGCGATTCTGGGCTGATGACAACGAAATTGATGATGTCACAGGAATTTGTGATATGCC
TAGTCTTTCCTTGTTATCTCTCAAAGGCAATAGACTAGTTGATGTGGGCCGTTTGAAGAC
TATTGCATCTTGTCATGTGCTCAAAACTCTTGACATAAGACAGAATCCGTTTGAGTGTTC
CGAGGCAGATGTAAAGAGATTGATGCCGGATGTAAAGGTCTCTGTGTA
| PANTHER |
RabGGTase_alpha (IPR032955) - T[1-425] 8.7E-102 |
| ProSiteProfiles |
Prenyl_trans_a (IPR002088) - T[44-78] 8.549 - T[87-121] 14.028 - T[123-157] 15.187 - T[160-194] 15.4 - T[206-240] 14.709 |
| Pfam |
Prenyl_trans_a (IPR002088) - T[91-116] 7.0E-7 - T[127-154] 9.2E-8 - T[164-190] 5.6E-8 - T[210-236] 1.1E-8 |
| Gene3D |
LRR_dom_sf (IPR032675) - T[431-553] 2.9E-16 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| PGTA_HUMAN | 40.669 % | 397 | 1.17E-132 |