Aniseed - Transcript Card

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chrUn.g06089.01.t

Possible name(s)

AEBP1; CPXM2; F8

Gene model

Boschl.CG.Botznik2013.chrUn.g06089

Location

chrUn [40,183,334 / 40,186,411]

Sequences

Amino acid sequence

Length: 154

>Boschl.CG.Botznik2013.chrUn.g06089.01.p
MKSGLLSDSAIISSTHWGARHEQYRARLDNRVSEGSTGSWSSKTNTIGEWIGVDFGTVKN
VAGVVTQGRPQYLNQWVSKFKVACGIDQNDFQFVMKGDSEMIFTGNSDFETKVYNRFPAA
VSCRYIRLYPQEWNNHISMRFELVHGHCFDIKPL

Nucleotide sequence

Length: 465

>Boschl.CG.Botznik2013.chrUn.g06089.01.t
TGAAGTCCGGATTACTTTCTGACTCTGCGATAATTTCATCGACACACTGGGGTGCGAGAC
ACGAACAGTACCGAGCACGTCTGGATAATAGAGTATCCGAAGGAAGCACGGGCTCGTGGT
CATCGAAGACAAGTACGATTGGCGAGTGGATAGGGGTTGACTTCGGAACGGTGAAAAATG
TAGCTGGAGTGGTCACACAAGGACGACCGCAGTATCTCAATCAGTGGGTCAGCAAATTCA
AAGTAGCATGCGGAATTGATCAAAATGACTTTCAGTTTGTGATGAAAGGCGATTCTGAAA
TGGTTTTCACTGGGAACTCGGACTTTGAAACCAAAGTCTACAATCGCTTCCCGGCAGCAG
TTTCCTGTCGATACATTCGGCTCTATCCGCAGGAATGGAACAATCATATCTCTATGAGAT
TTGAATTGGTGCACGGCCACTGCTTCGACATTAAGCCGCTTTGAA

InterProScan

Gene3D	Galactose-bd-like_sf (IPR008979) - T[1-147] 1.1E-42
SUPERFAMILY	Galactose-bd-like_sf (IPR008979) - T[1-143] 9.28E-38
ProSiteProfiles	FA58C (IPR000421) - T[1-146] 29.474
SMART	FA58C (IPR000421) - T[2-144] 1.6E-10
Pfam	FA58C (IPR000421) - T[13-143] 1.9E-26
ProSitePatterns	FA58C (IPR000421) - T[39-68] .

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
CPXM2_HUMAN	39.091 %	83.2	2.9E-19
AEBP1_HUMAN	31.126 %	74.3	3.7E-16
FA8_HUMAN	29.032 %	75.1	1.61E-16