- Transcript 'KH2012:KH.C1.423.v5....' >
- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chrUn.g06148.01.t
Possible name(s)
RPL23A
Gene model
Location
chrUn [40,515,008 / 40,516,519]
Amino acid sequence
Length: 162
>Boschl.CG.Botznik2013.chrUn.g06148.01.p
MPLTPDDMYRVRHFRRQNECTFAKERALKAKKAVMKGLHSHRQKKVRTSVHFHIPKTLKH
ERKPKYPRKSAQKRDRMDQFAIVQHPLTTESAMKKIEDNNTLVFIVDIKANKPQIKTAVK
KLYDIDVSKVNTLIRPDGKKKAYVKLAPDYDALDVANKIGII
Nucleotide sequence
Length: 489
>Boschl.CG.Botznik2013.chrUn.g06148.01.t
AATGCCGTTGACTCCCGATGATATGTATCGGGTCCGTCACTTCCGTCGTCAGAACGAGTG
CACATTTGCAAAGGAGCGCGCCTTGAAGGCGAAGAAGGCCGTCATGAAGGGACTACATTC
TCACAGGCAGAAAAAAGTCCGAACCTCTGTGCATTTTCACATCCCGAAAACGCTCAAACA
CGAGAGGAAACCCAAGTACCCTCGAAAGAGTGCCCAGAAGAGAGACAGGATGGACCAGTT
TGCGATAGTGCAACATCCTCTGACGACAGAAAGTGCAATGAAGAAGATTGAGGACAACAA
CACTCTCGTCTTCATTGTTGACATCAAGGCCAACAAGCCCCAGATCAAAACGGCCGTGAA
AAAACTGTACGACATCGACGTGTCAAAAGTCAATACTCTCATTCGACCCGACGGCAAGAA
GAAGGCGTACGTGAAGCTTGCTCCGGACTATGACGCTTTGGATGTTGCCAACAAGATTGG
AATTATCTA
| Pfam |
Ribosomal_L23/L25_N (IPR005633) - T[23-72] 5.0E-23 |
| Gene3D |
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[44-162] 4.8E-61 |
| SUPERFAMILY |
Ribosomal_L23/L15e_core_dom_sf (IPR012678) - T[80-155] 6.47E-28 |
| Pfam |
Ribosomal_L25/23 (IPR013025) - T[82-145] 6.8E-16 |
| Hamap |
Ribosomal_L25/23 (IPR013025) - T[82-162] 22.896 |
| TIGRFAM |
Ribosomal_L23 (IPR019985) - T[86-162] 6.0E-31 |
| ProSitePatterns |
Ribosomal_L23/L25_CS (IPR001014) - T[140-155] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RL23A_HUMAN | 77.778 % | 201 | 3.84E-67 |