- Transcript 'KH2012:KH.C11.460.v1...' >
- Transcript 'Boleac.CG.SB_v3.S254...' >
- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chrUn.g07242.01.t
Possible name(s)
FP565260.1; PWP2; WDR5
Gene model
Location
chrUn [47,449,275 / 47,452,414]
Amino acid sequence
Length: 867
>Boschl.CG.Botznik2013.chrUn.g07242.01.p
MKYSYKFANLLGTVYTKGNAIFLPNADTLCSPVGNHLTLFNLKENTSETLPVTTKYNISQ
IAFSPDCVLAIILDEEGNSYLVSLQSKSILHKFRFQKPVSCIKFSPDGTKFIVCMEKVVL
MYHAPGRTREINPFKLIRSYHDVHDDVTNVDWSDNSLAFAMCSKDMMTRIHSIFPGQYLK
YMFGGHKDEVVACFFESQSFDLYTVGKEGALNVWECDVDFDFFDKDNEDPDTDKERKSWS
FKRLAKHYFNAEGDFNFVTSASYHKQTHILCTGFESGSFVIHELPGFNWIHSLNMADHPL
SSVSFNSAGDWIALGCSTSGQLLVWEWRSESYVMKQHGHLNNMACLDYSPDGRFLVTGGE
DGKVKVWNASSGFCFVTFTEHKSGVTGVVFTSNGNVVVSASLDGTVRAFDMHRYRNFRTF
TSPNPVQFISLAVDGSGDIVCAGSKDNFGVFLWSMQTGKLLSILAGHEGPVVSLAFSSRE
SVLASGSWDGAVRLWNVLEGKGSRETLALNHDVLAVAFSADGATLTVSSLNTEITFWDAS
TGVQTGTIECKYDIACGRSELDRTSSKTKAEGKMFDAIAFSTDGSSLIAGGKFLNICIYS
VEGCLLVKSFTVSQNFSLDATEEFLNRRKMTDFGPQALIDTDDAKVSLPGVMKGDMCNRA
FKPEVRVSEVKFSPTGREWAAVTTEGILVYSLDGNSVFSPFEVDMDITPDQIREKSKLGQ
HVVAITMSLKLNEKDIIREVVENVPHSAIDVVSRHLKPLYVGKLLSYIAGEISGTRHLQF
YVMWTRYLLLHHCSMLKSRWKKVLPVVNNLLKYLVVVKEDLGSICDRNGHQIEFIVSMSE
HPNKRLRLAVQDSDDDSGIGNFNEEMV
Nucleotide sequence
Length: 2,604
>Boschl.CG.Botznik2013.chrUn.g07242.01.t
TGAAGTACTCATATAAGTTTGCGAATTTGCTAGGGACCGTCTACACAAAAGGAAATGCAA
TATTCCTTCCAAATGCAGATACCCTATGCAGCCCAGTCGGCAATCACCTGACTTTGTTCA
ATCTGAAAGAGAACACATCAGAGACCCTTCCAGTCACTACTAAGTATAACATTTCCCAAA
TCGCCTTTTCTCCTGACTGTGTCCTCGCCATTATATTGGATGAAGAAGGCAACTCCTATC
TCGTGAGTCTTCAGAGCAAATCCATTTTGCACAAATTCCGATTCCAGAAACCTGTGAGCT
GTATCAAGTTCAGTCCTGATGGCACAAAGTTTATTGTGTGCATGGAAAAAGTCGTGTTGA
TGTACCACGCTCCCGGAAGAACGAGAGAAATCAACCCGTTCAAGTTGATTCGGAGCTACC
ACGATGTTCACGACGACGTGACTAATGTAGACTGGTCGGATAATTCGTTGGCATTTGCGA
TGTGCAGTAAAGATATGATGACGAGGATTCACTCGATTTTCCCGGGCCAGTATCTTAAAT
ATATGTTCGGTGGTCACAAAGACGAAGTGGTGGCCTGTTTTTTCGAAAGCCAGTCCTTCG
ATTTATACACGGTGGGCAAAGAAGGTGCGCTGAATGTTTGGGAATGCGATGTGGATTTTG
ATTTCTTCGACAAGGACAACGAGGATCCCGATACTGACAAGGAGAGGAAGTCGTGGAGTT
TCAAAAGATTGGCCAAACATTATTTCAACGCGGAGGGTGACTTCAATTTTGTGACAAGCG
CCAGCTACCACAAACAAACCCATATTTTATGCACGGGTTTTGAATCGGGATCGTTCGTCA
TACATGAACTGCCCGGATTCAATTGGATTCACTCTCTCAACATGGCTGACCATCCGCTAT
CATCGGTATCGTTTAATTCCGCGGGAGACTGGATTGCTTTGGGGTGTTCCACTTCAGGCC
AGCTTTTAGTGTGGGAATGGCGAAGCGAGTCTTACGTCATGAAACAGCACGGGCATTTGA
ATAATATGGCTTGCCTTGATTACTCTCCCGACGGACGCTTTCTAGTGACTGGCGGAGAAG
ACGGCAAGGTTAAAGTGTGGAATGCTTCCAGTGGATTTTGTTTTGTTACATTTACTGAAC
ATAAGTCCGGCGTGACGGGGGTGGTTTTTACCAGTAACGGAAATGTGGTAGTGTCGGCAT
CGTTAGACGGCACCGTGAGAGCATTTGATATGCACCGATATAGAAATTTCCGCACCTTCA
CGTCTCCGAATCCTGTACAGTTCATCTCGCTAGCGGTCGACGGCAGTGGGGATATAGTAT
GCGCCGGTTCCAAAGACAATTTCGGGGTATTTTTGTGGTCAATGCAGACCGGGAAACTCC
TCAGTATCCTTGCGGGTCATGAAGGCCCTGTCGTGTCTCTGGCGTTCTCGTCGAGAGAGT
CTGTTCTCGCGAGCGGTTCCTGGGACGGTGCTGTCCGGCTTTGGAACGTCTTGGAAGGGA
AGGGATCACGGGAAACTTTGGCTTTGAATCACGATGTTTTGGCAGTCGCTTTCAGTGCAG
ACGGCGCGACTCTGACTGTTTCATCGCTGAACACGGAGATCACCTTTTGGGACGCTTCGA
CCGGCGTGCAAACCGGTACCATAGAGTGCAAGTATGACATAGCATGCGGCCGTAGCGAGC
TCGACCGGACATCCAGCAAAACCAAGGCCGAAGGCAAGATGTTCGACGCTATTGCGTTCT
CGACTGATGGCTCGTCCCTCATTGCCGGAGGGAAATTCCTAAACATATGTATCTACAGCG
TTGAGGGATGCCTTTTGGTGAAGAGTTTCACGGTCAGTCAGAACTTTTCACTGGATGCAA
CGGAAGAATTCTTGAACAGAAGGAAGATGACGGATTTTGGCCCGCAGGCTTTAATTGACA
CGGATGATGCGAAAGTAAGTCTGCCCGGCGTAATGAAAGGGGACATGTGCAACAGGGCGT
TCAAGCCCGAGGTGAGAGTGTCCGAAGTCAAGTTTTCTCCGACCGGAAGAGAGTGGGCGG
CCGTGACGACGGAAGGCATACTCGTGTATTCTCTGGACGGCAATTCAGTGTTCAGTCCGT
TTGAAGTGGATATGGACATTACGCCGGATCAGATACGAGAAAAATCGAAGCTGGGACAAC
ACGTTGTCGCGATCACTATGTCGCTGAAACTCAACGAGAAGGATATCATCCGAGAGGTGG
TTGAGAACGTGCCACATTCCGCCATTGATGTCGTGTCAAGGCACTTGAAGCCGCTCTATG
TCGGCAAGCTGCTATCTTACATCGCCGGGGAGATAAGCGGAACACGGCACTTGCAGTTTT
ATGTGATGTGGACCAGGTACCTACTGCTGCACCACTGCTCGATGCTCAAGAGCAGATGGA
AGAAAGTGCTGCCTGTCGTGAATAATCTGCTGAAGTACTTGGTGGTGGTGAAGGAAGACC
TAGGGTCGATTTGCGACCGGAATGGACATCAGATAGAGTTCATCGTGTCGATGTCCGAGC
ATCCGAATAAAAGATTAAGACTCGCCGTACAGGATTCTGACGATGATTCTGGCATTGGTA
ATTTCAACGAGGAGATGGTTTGAC
| PANTHER |
PWP2 (IPR027145) - T[4-844] 0.0 |
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[12-218] 3.5E-17 - T[230-428] 7.5E-35 |
| SMART |
WD40_repeat (IPR001680) - T[86-123] 1.1 - T[133-172] 0.59 - T[176-215] 12.0 - T[244-283] 130.0 - T[286-326] 12.0 - T[329-368] 3.8E-8 - T[371-410] 6.6E-7 - T[413-454] 49.0 - T[457-496] 4.6E-10 - T[503-538] 9.4 - T[654-691] 130.0 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[131-217] 1.45E-63 - T[286-543] 1.45E-63 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[251-547] 42.685 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[336-377] 15.454 - T[378-419] 12.113 - T[464-505] 15.722 |
| Pfam |
WD40_repeat (IPR001680) - T[337-368] 2.1E-7 - T[374-409] 2.9E-4 - T[458-496] 5.5E-7 |
| PRINTS |
G-protein_beta_WD-40_rep (IPR020472) - T[355-369] 2.9E-5 - T[397-411] 2.9E-5 - T[483-497] 2.9E-5 |
| ProSitePatterns |
WD40_repeat_CS (IPR019775) - T[355-369] . - T[483-497] . |
| Pfam |
SSU_processome_Utp12 (IPR007148) - T[732-836] 6.2E-15 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| WDR5_HUMAN | 29.126 % | 102 | 1.25E-23 |
| POC1A_HUMAN | 26.462 % | 103 | 1.69E-23 |
| PWP2_HUMAN | 49.774 % | 917 | 0 |