- EST 'AHC0AAA220YI18_RM1' >
- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chrUn.g08159.01.t
Possible name(s)
TMED3; TMED7; TMED7-TICAM2
Gene model
Location
chrUn [53,245,672 / 53,247,554]
Amino acid sequence
Length: 210
>Boschl.CG.Botznik2013.chrUn.g08159.01.p
MTLLNMLACVAFAMLLNIVFATELTFELPDNAKQCFYQEVDKDTSVTLEYQVIMGGRYDV
DCKIEDPDGLELYSKKREQYDSYQWKTMKKGVYKVCFSNEFSTITHKVVYFDWQYGAEAP
LLPAMEKATALTQMETSVVTVHEEVNKVIEYQTKFRLREATGRLFATSLSEKVQIWSFLQ
MLILFVVAIGQIVILRSFFSDKQNRARATT
Nucleotide sequence
Length: 633
>Boschl.CG.Botznik2013.chrUn.g08159.01.t
GATGACACTACTTAATATGCTGGCTTGTGTCGCTTTTGCAATGCTGTTAAATATTGTCTT
TGCGACCGAACTGACTTTCGAATTGCCGGACAATGCCAAACAATGTTTTTATCAAGAAGT
TGACAAGGACACCTCGGTTACGCTGGAGTATCAAGTCATAATGGGCGGACGTTATGATGT
CGATTGCAAGATCGAAGATCCGGATGGTCTCGAACTATACAGTAAAAAGAGAGAGCAATA
TGATTCTTATCAATGGAAAACTATGAAGAAAGGTGTATATAAGGTTTGCTTCAGCAACGA
ATTTTCAACCATCACACACAAAGTTGTCTACTTCGACTGGCAATATGGAGCGGAGGCACC
TCTCTTACCGGCAATGGAGAAAGCTACAGCGCTAACTCAAATGGAGACCAGCGTTGTAAC
TGTTCACGAGGAAGTCAACAAAGTCATCGAATATCAAACAAAATTCAGACTGCGCGAAGC
CACAGGACGGCTGTTTGCCACGTCGTTGAGTGAAAAAGTGCAGATCTGGTCCTTCCTTCA
AATGCTAATCCTATTTGTGGTCGCCATTGGACAAATTGTCATACTGAGAAGCTTTTTCAG
CGATAAACAAAACCGCGCTCGCGCTACCACGTG
| PANTHER |
TMED7 (IPR015718) - T[10-204] 2.4E-78 |
| PANTHER |
TMP21-related (IPR015720) - T[10-204] 2.4E-78 |
| SMART |
GOLD_dom (IPR009038) - T[23-200] 2.7E-62 |
| Pfam |
GOLD_dom (IPR009038) - T[24-199] 8.0E-46 |
| SUPERFAMILY |
GOLD_dom_sf (IPR036598) - T[32-119] 9.55E-21 |
| ProSiteProfiles |
GOLD_dom (IPR009038) - T[33-115] 19.22 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TMED2_HUMAN | 32.544 % | 99.8 | 3.73E-26 |
| TMED7_HUMAN | 57.923 % | 237 | 7.95E-80 |
| TMED3_HUMAN | 52.91 % | 220 | 5.04E-73 |