- Clone 'cima824063' >
- Transcript 'KH2012:KH.C2.958.v1....' >
- Transcript 'KH2012:KH.C4.584.v1....' >
- Clone 'cien54236' >
- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chrUn.g08425.01.t
Possible name(s)
ACTB; ACTG1; ACTG2
Gene model
Location
chrUn [54,884,835 / 54,886,470]
Amino acid sequence
Length: 376
>Boschl.CG.Botznik2013.chrUn.g08425.01.p
MCDDESAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVFDSGDGVSHTVPIYEGYALPHAILRLD
LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTAASSSSIEKS
YELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVL
SGGSTMYPGIADRMQKEIAALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK
QEYDESGPSIVHRKCF
Nucleotide sequence
Length: 1,131
>Boschl.CG.Botznik2013.chrUn.g08425.01.t
AATGTGTGACGACGAATCCGCTGCTCTGGTTGTCGATAATGGATCCGGTATGTGCAAAGC
CGGATTTGCCGGAGACGACGCCCCTCGTGCCGTTTTCCCGTCCATTGTCGGACGTCCAAG
ACATCAGGGTGTCATGGTCGGTATGGGACAAAAAGACTCGTACGTCGGAGACGAAGCCCA
GAGCAAGAGAGGAATCCTGACTTTGAAATATCCCATCGAACACGGAATCGTCACGAACTG
GGACGACATGGAGAAGATCTGGCATCACACTTTCTACAACGAACTCCGCGTCGCCCCAGA
AGAACACCCGGTCCTCCTCACAGAAGCTCCACTCAACCCGAAGGCTAACCGTGAAAAGAT
GACCCAAATCATGTTTGAAACCTTCAACACCCCCGCCATGTACGTCGCGATCCAGGCCGT
TCTGTCGCTGTACGCGTCCGGACGTACCACCGGTATCGTATTCGACAGCGGTGATGGCGT
ATCCCACACTGTCCCAATCTACGAAGGGTACGCGCTTCCTCACGCTATCTTGCGTCTGGA
TTTGGCCGGACGAGACTTGACCGATTACTTAATGAAGATCTTGACGGAAAGAGGATATTC
CTTCACCACCACAGCCGAGAGAGAAATTGTCCGTGACATCAAGGAAAAGCTCTGCTACGT
CGCCCTCGACTTCGAACAAGAAATGCAAACTGCTGCTTCAAGCAGCAGCATTGAGAAATC
CTACGAGCTTCCCGACGGACAGGTGATCACTGTCGGAAACGAACGATTCCGATGCCCAGA
AGCACTTTTCCAACCTTCCTTCCTCGGAATGGAATCTGCCGGAATTCACGAGACCACCTA
CAACTCCATCATGAAGTGTGACGTCGATATTCGTAAAGACTTGTACGCCAATACTGTCCT
GTCGGGAGGATCGACTATGTATCCAGGAATCGCCGACAGAATGCAGAAGGAAATTGCCGC
CCTTGCCCCACCCACGATGAAGATCAAGATCATCGCGCCCCCAGAAAGGAAATATTCCGT
TTGGATCGGTGGCTCCATCCTCGCTTCTTTGTCTACTTTCCAACAGATGTGGATCTCTAA
ACAAGAGTACGACGAGTCCGGCCCATCCATTGTACATAGAAAGTGCTTCTA
| PANTHER |
Actin (IPR004000) - T[2-375] 2.7E-272 |
| Pfam |
Actin (IPR004000) - T[4-376] 3.2E-151 |
| SMART |
Actin (IPR004000) - T[6-376] 1.1E-239 |
| PRINTS |
Actin (IPR004000) - T[27-36] 2.7E-57 - T[50-61] 2.7E-57 - T[62-84] 2.7E-57 - T[116-129] 2.7E-57 - T[141-160] 2.7E-57 - T[237-253] 2.7E-57 |
| ProSitePatterns |
Actin_CS (IPR004001) - T[54-64] . - T[357-365] . |
| ProSitePatterns |
Actin/actin-like_CS (IPR020902) - T[105-117] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ACTG_HUMAN | 96.257 % | 759 | 0 |
| ACTB_HUMAN | 96.791 % | 761 | 0 |
| ACTH_HUMAN | 92.553 % | 744 | 0 |