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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.L117.1.v2....' > 
  2. Transcript 'Phfumi.CG.MTP2014.S2...' > 
  3. Clone 'cign060j12' > 
  4. Transcript 'Moocul.CG.ELv1_2.S94...' > 
  5. Transcript 'Boschl.CG.Botznik201...'

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chrUn.g09209.01.t

Possible name(s)

SGTB; STIP1; WDTC1

Gene model

Boschl.CG.Botznik2013.chrUn.g09209

Location

chrUn [59,548,567 / 59,550,148]

Sequences

Amino acid sequence

Length: 143

>Boschl.CG.Botznik2013.chrUn.g09209.01.p
MPFQSQKKKLLGNEAYKKQNYAEASKLYDEAIQLDPSDAMLYFNKAAVLMSTKQLNVARF
LCLKAVHILRISNKKDVNALAKVVARLGRIEKFSGNYPAAIDLYEASLSLQFKEEVKQEA
EECRRALSVSFCIHGTPFNFNFN

Nucleotide sequence

Length: 432

>Boschl.CG.Botznik2013.chrUn.g09209.01.t
TGCCGTTTCAGTCGCAAAAGAAAAAATTATTGGGTAACGAGGCGTATAAGAAGCAAAATT
ACGCGGAAGCTTCGAAGCTTTATGATGAAGCCATTCAACTGGACCCATCGGATGCGATGC
TGTATTTCAATAAAGCGGCGGTCCTCATGTCCACGAAGCAATTGAACGTGGCGAGGTTTC
TCTGTCTTAAGGCTGTTCACATTTTGAGGATCAGTAACAAGAAAGATGTCAACGCTCTAG
CGAAGGTTGTCGCCAGACTTGGCCGTATCGAGAAATTTAGCGGAAACTACCCAGCTGCCA
TCGATCTTTACGAAGCATCGCTAAGTCTCCAATTTAAAGAGGAGGTTAAGCAAGAAGCAG
AAGAGTGCCGACGTGCTCTATCCGTATCCTTCTGTATACATGGCACACCGTTCAACTTCA
ACTTCAACTGAA

InterProScan

ProSiteProfiles
TPR-contain_dom (IPR013026) - T[1-114] 12.629
SUPERFAMILY
TPR-like_helical_dom_sf (IPR011990) - T[4-127] 2.9E-25
Gene3D
TPR-like_helical_dom_sf (IPR011990) - T[4-130] 6.3E-25
ProSiteProfiles
TPR_repeat (IPR019734) - T[5-38] 10.148 - T[81-114] 7.493
SMART
TPR_repeat (IPR019734) - T[5-38] 0.0046 - T[39-72] 210.0 - T[81-114] 50.0

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value