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TRANSCRIPT CARD

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  1. Clone 'cieg003n20' > 
  2. Transcript 'Phfumi.CG.MTP2014.S3...' > 
  3. Transcript 'Boschl.CG.Botznik201...'

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chrUn.g09855.01.t

Possible name(s)

FCN3; TNXB

Gene model

Boschl.CG.Botznik2013.chrUn.g09855

Location

chrUn [63,705,509 / 63,706,691]

Sequences

Amino acid sequence

Length: 314

>Boschl.CG.Botznik2013.chrUn.g09855.01.p
MELSLFQSGDGHDLHNYHPWSVQIEVSHIRETCFITRSSDILNFIVNTERYVTIPLFGPN
TINDGPSGLYTLEYLMELFKFTLLFAYVCNAFAGSSSFKGIVCDQCDQWCSENTGITNGV
VTRVGKAGPRGARGAPGPKGPVGRPGDIGPKGRVGPVGPRGLKGEVNMTSVEYSIDRKIR
KVVEMFNRTDCGSVRLEDAPVRNESGGVFKLYIPFIGFRKVYCDVLDEGGSWLVFQRRLI
GDVDFLRNWADYATGFGNLQGDFWLGLEPMHQLTKERDVELKVSMVTQDGIQLFAKYRCG
NVFMALQFVVILIP

Nucleotide sequence

Length: 945

>Boschl.CG.Botznik2013.chrUn.g09855.01.t
TGGAACTTAGCTTGTTCCAGAGCGGTGATGGTCATGACCTACATAATTATCACCCGTGGT
CGGTACAAATTGAAGTTTCGCATATACGAGAGACATGCTTCATCACGAGGTCAAGTGATA
TCTTAAATTTCATAGTCAATACCGAAAGGTATGTTACCATTCCACTATTTGGACCTAATA
CTATCAATGATGGACCCTCAGGCCTGTATACACTTGAATATTTGATGGAGCTTTTCAAAT
TTACCCTGCTCTTTGCATATGTGTGCAACGCGTTCGCTGGATCATCGTCTTTCAAAGGAA
TTGTCTGTGATCAATGTGACCAATGGTGTTCGGAAAATACGGGTATTACGAATGGTGTGG
TGACTAGGGTCGGCAAGGCTGGACCCCGTGGAGCTCGCGGTGCCCCGGGCCCCAAAGGAC
CCGTTGGTAGACCTGGTGATATCGGGCCGAAGGGACGAGTTGGGCCAGTCGGGCCTCGGG
GACTAAAGGGAGAAGTCAACATGACATCCGTCGAATACAGTATCGATAGAAAAATAAGGA
AAGGGGTCGAAATGTTCAACCGGACCGACTGTGGTAGCGTAAGACTTGAAGACGCACCTG
TCCGAAACGAATCCGGTGGGGTATTTAAGTTGTACATACCATTCATTGGGTTTAGAAAAG
TTTATTGCGACGTTCTCGATGAAGGTGGAAGTTGGTTAGTATTCCAACGGAGATTGATCG
GTGACGTTGATTTCCTTCGAAACTGGGCTGATTACGCTACTGGATTTGGGAATTTACAAG
GCGATTTTTGGCTTGGTCTTGAGCCCATGCACCAGCTGACAAAGGAAAGGGATGTCGAGT
TGAAAGTCAGCATGGTTACACAGGACGGAATTCAGTTGTTCGCTAAATACAGGTGTGGTA
ATGTTTTCATGGCTTTGCAATTTGTAGTAATTCTAATACCATAGT

InterProScan

Pfam
Collagen (IPR008160) - T[124-165] 1.5E-7
Gene3D
Fibrinogen_a/b/g_C_1 (IPR014716) - T[161-303] 5.1E-30
ProSiteProfiles
Fibrinogen_a/b/g_C_dom (IPR002181) - T[182-314] 21.099
SMART
Fibrinogen_a/b/g_C_dom (IPR002181) - T[186-313] 8.7E-7
SUPERFAMILY
Fibrinogen-like_C (IPR036056) - T[190-297] 6.28E-30
Pfam
Fibrinogen_a/b/g_C_dom (IPR002181) - T[220-298] 1.1E-24

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
FCN1_HUMAN 36.126 % 108 4.01E-27
FCN3_HUMAN 47.253 % 90.5 6.64E-21
TENX_HUMAN 46.591 % 91.3 3.37E-20