Aniseed - Transcript Card

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chrUn.g10196.01.t

Possible name(s)

DLL3; EYS; NOTCH1

Gene model

Boschl.CG.Botznik2013.chrUn.g10196

Location

chrUn [65,823,679 / 65,828,311]

Sequences

Amino acid sequence

Length: 375

>Boschl.CG.Botznik2013.chrUn.g10196.01.p
MCDCGVRSFHHVVPMSFCLRGKVACYWNHCLGVECSGRGICIEQMYGHRCVCELGFEGES
CEDEVTVELGPCSPSPCQGNCTCVESCKHEYGYYCASAGGFTGKNCTVPVSSRNGLQITI
PLPFSNCGSRTDVNGPTFVVGNRVIADRENAAFSVETPIVDFQCIYQRQYKLITSMKPVV
AEPVSKRGYGKFTPTVELCKTTSCPAVCPLEFSVSNGAIYTVGEVIHMSVSVLPADAFFD
FVTVISAMYLSCEDDSSTGMTLVEDGCPAQDELYVSASTGRVACVSMQTPRSDCPTFYIH
LHLTMCPETELTACPSGDKLRCSSGRVVRSVRLSENTVDTMVGPITVIHGVAGIEEIELY
PGASNESFLIFNPNK

Nucleotide sequence

Length: 1,126

>Boschl.CG.Botznik2013.chrUn.g10196.01.t
TATGTGCGATTGCGGCGTTCGATCTTTTCATCACGTGGTACCAATGTCGTTCTGTCTTAG
AGGCAAAGTAGCTTGCTACTGGAACCATTGCTTGGGCGTGGAGTGCAGCGGCCGTGGAAT
ATGCATAGAACAGATGTACGGACACAGGTGCGTTTGTGAGCTTGGCTTTGAAGGCGAAAG
TTGCGAAGATGAAGTTACCGTGGAATTGGGACCCTGCTCCCCGAGCCCCTGTCAAGGGAA
CTGTACCTGCGTAGAGTCTTGTAAACATGAGTACGGTTATTACTGCGCCAGTGCCGGCGG
GTTTACCGGGAAGAATTGCACTGTCGCCGTGTCTTCGAGAAACGGCCTCCAGATCACCAT
ACCTCTCCCGTTCTCAAACTGTGGTTCTAGAACTGACGTAAACGGACCGACGTTCGTCGT
AGGCAACCGCGTGATAGCGGATCGTGAAAACGCGGCTTTTAGCGTCGAGACTCCGATCGT
CGACTTCCAATGCATTTACCAACGTCAGTACAAGCTCATAACTTCCATGAAGCCTGGTGT
CGCAGAACCGGTTAGCAAGCGCGGTTACGGAAAGTTCACTCCGACAGTCGAGCTGTGCAA
GACCACGTCCTGTCCGGCCGTGTGTCCGCTCGAATTCAGCGTGTCTAACGGCGCTATCTA
CACTGTGGGAGAAGTCATTCACATGTCCGTTTCGGTTCTTCCCGCGGACGCTTTCTTTGA
TTTCGTGACGGTGATCAGCGCGATGTATTTGTCATGCGAAGACGATTCGTCGACTGGGAT
GACGCTGGTTGAGGACGGGTGTCCGGCGCAGGACGAGTTATACGTGAGCGCTTCGACAGG
TCGAGTTGCGTGCGTGTCGATGCAAACTCCGCGATCCGACTGCCCGACTTTCTACATCCA
CCTGCACCTTACTATGTGTCCTGAAACGGAGCTCACGGCTTGCCCGTCCGGTGACAAATT
GAGATGCTCGAGCGGTCGTGTCGTGCGTTCTGTGCGTCTGTCTGAGAACACTGTTGACAC
GATGGTCGGCCCGATCACCGTGATCCACGGCGTCGCCGGTATCGAAGAGATCGAACTCTA
CCCCGGAGCCTCGAACGAATCTTTTCTGATCTTCAATCCAAACAAG

InterProScan

ProSiteProfiles	EGF-like_dom (IPR000742) - T[26-62] 14.302 - T[68-107] 8.237
ProSitePatterns	EGF-like_CS (IPR013032) - T[50-61] . - T[50-61] .
SMART	ZP_dom (IPR001507) - T[60-317] 0.0027
ProSiteProfiles	ZP_dom (IPR001507) - T[71-321] 11.498

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value