- Transcript 'Phmamm.CG.MTP2014.S1...' >
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- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chrUn.g10233.01.t
Possible name(s)
ATP5F1B; ATP6V1B1; ATP6V1B2
Gene model
Location
chrUn [66,015,773 / 66,017,318]
Amino acid sequence
Length: 514
>Boschl.CG.Botznik2013.chrUn.g10233.01.p
MINPARFCLRALQSARNNVAQVSAVGSQRGYAGDAPASKSPSGLVGEIVAVIGPVVDVQF
EDGRPPILNALEVEGRESRLVLEVAQHLGQNTVRTIAMDSTERLIRGQKCVDTGDSIRVP
VGPGTLGRIINVIGEPIDERGPVETKTYSSIHASAPELIETGGAQEIMETGIKVVDVLAP
YARGGKIGLFGGAGVGKTVFIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIESGV
ISLKDKTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAG
SEVSALLGRIPSAVGYQPTLATDMGTMQERITTTKKGSITSVQAIYVPADDLTDPSPATT
FSHLDATTVLSRQVSELGFYPAVDPLESSSRIMDPNIVGIEHYDCARQVKKILQDLKSLQ
DIIAILGMGELSQEEKLTVTRARKIQRFLTQPFTVAETFTGTPGKLVSLKDAIKGFNMIL
AGEMDHIPEIAFYMVGDIDEVQAKAEQLAIDTAE
Nucleotide sequence
Length: 1,545
>Boschl.CG.Botznik2013.chrUn.g10233.01.t
TGATTAATCCTGCGCGTTTCTGCTTGAGGGCTTTGCAGTCCGCAAGAAACAATGTCGCTC
AAGTTTCGGCGGTCGGTAGCCAAAGAGGATATGCGGGCGATGCGCCAGCATCCAAAAGCC
CAAGTGGATTAGTCGGCGAGATTGTTGCTGTCATTGGCCCTGTAGTCGATGTCCAGTTCG
AAGATGGCCGACCACCGATTCTCAACGCCTTGGAAGTGGAAGGCCGGGAGTCGAGATTAG
TTCTTGAAGTAGCGCAGCATCTTGGACAAAACACCGTCCGCACCATTGCTATGGATTCAA
CCGAGCGATTGATTCGTGGCCAAAAATGCGTTGACACCGGAGATTCTATCAGAGTACCTG
TCGGACCTGGAACATTAGGTAGAATCATCAATGTTATCGGCGAACCGATTGACGAAAGGG
GTCCGGTTGAGACCAAAACGTATTCGTCTATCCATGCGTCCGCCCCTGAGCTGATCGAAA
CTGGAGGCGCCCAGGAAATTATGGAAACTGGAATCAAGGTGGTCGATGTCCTTGCTCCTT
ATGCTAGGGGTGGTAAAATTGGATTGTTCGGTGGTGCCGGTGTTGGAAAGACCGTGTTCA
TCATGGAACTGATCAACAACGTAGCCAAAGCTCATGGTGGTTATTCCGTTTTCGCTGGTG
TCGGTGAACGTACCAGAGAAGGTAATGATTTGTATCACGAAATGATAGAATCGGGTGTTA
TTTCTCTCAAGGACAAGACCTCGAAAGTAGCGCTTGTATACGGTCAAATGAACGAACCCC
CAGGTGCCAGAGCCCGTGTCGCTTTGACCGGATTGACCGTCGCTGAATATTTCCGTGATC
AAGAAGGCCAAGATGTGCTGCTCTTCATTGACAACATTTTCAGATTCACCCAAGCCGGTT
CGGAAGTATCCGCTTTGCTAGGTCGTATTCCATCTGCTGTAGGTTACCAACCTACTTTGG
CTACTGACATGGGTACTATGCAGGAACGAATTACCACCACAAAGAAAGGTTCCATCACTT
CGGTACAAGCCATCTACGTACCTGCTGATGACTTGACTGATCCTAGCCCAGCCACCACTT
TCTCTCACTTGGACGCCACCACTGTGTTGTCGCGACAGGTATCCGAATTGGGTTTCTACC
CGGCTGTGGACCCACTGGAGTCCTCATCTCGTATTATGGATCCTAACATCGTAGGAATTG
AGCACTACGATTGTGCCCGTCAAGTGAAGAAGATTCTTCAAGATTTGAAATCTCTCCAGG
ATATTATCGCTATCTTGGGTATGGGCGAGTTGTCGCAGGAGGAAAAATTGACCGTAACCC
GCGCCAGAAAGATCCAAAGATTCTTGACCCAGCCTTTCACCGTTGCCGAGACCTTCACGG
GAACACCGGGCAAGCTCGTGTCCTTGAAAGACGCCATCAAAGGCTTTAATATGATTTTGG
CCGGGGAAATGGACCACATTCCCGAGATTGCTTTTTACATGGTCGGAGACATTGATGAAG
TCCAAGCGAAGGCCGAGCAACTCGCAATCGACACCGCGGAATAAA
| Hamap |
ATP_synth_F1_bsu (IPR005722) - T[43-508] 55.124 |
| SUPERFAMILY |
ATPase_F1/V1/A1_a/bsu_N_sf (IPR036121) - T[44-115] 1.94E-23 |
| TIGRFAM |
ATP_synth_F1_bsu (IPR005722) - T[45-508] 4.7E-240 |
| Pfam |
ATPase_F1/V1/A1_a/bsu_N (IPR004100) - T[48-114] 2.2E-22 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[118-395] 1.74E-88 |
| Pfam |
ATPase_F1/V1/A1_a/bsu_nucl-bd (IPR000194) - T[171-390] 8.2E-63 |
| SMART |
AAA+_ATPase (IPR003593) - T[183-370] 2.6E-5 |
| ProSitePatterns |
ATPase_a/bsu_AS (IPR020003) - T[381-390] . |
| Gene3D |
ATPase_F1/V1_b/a_C (IPR024034) - T[393-512] 1.5E-54 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| VATB2_HUMAN | 27.749 % | 113 | 9.01E-27 |
| VATB1_HUMAN | 26.81 % | 114 | 2.5E-27 |
| ATPB_HUMAN | 78.346 % | 799 | 0 |