Aniseed - Transcript Card

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chrUn.g11362.01.t

Possible name(s)

FCHSD1; FCHSD2; SRGAP3

Gene model

Boschl.CG.Botznik2013.chrUn.g11362

Location

chrUn [72,939,176 / 72,944,491]

Sequences

Amino acid sequence

Length: 258

>Boschl.CG.Botznik2013.chrUn.g11362.01.p
RKKNQSGIFKSKAGLEKESQKLEQKCDEFNRSSTIARNEYILALATANAHQKKYYQLDIP
ECLKVLDGDVYTKFQDYLSAMSRYELEASGTAQEAYATSLQKSTMISREFSTRCFLNENP
VFEWGPKYDFEACEDDTSDGQLVAEQGTDGDDNSLNREARKWAGKFVKEKKQLQRLERLK
QKLEGLKNRYTENPEIANEASINDATLKLEKCLEDTRRLETYRLKSESKLDALRKAPGID
VDSWIQSAQNQVSHHQKY

Nucleotide sequence

Length: 778

>Boschl.CG.Botznik2013.chrUn.g11362.01.t
GGAGAAAGAAAAATCAGTCTGGTATTTTTAAATCCAAGGCAGGCTTGGAGAAAGAAAGTC
AAAAGTTGGAGCAAAAATGCGACGAGTTCAATCGAAGTTCCACAATCGCTCGTAACGAGT
ATATCCTGGCGCTTGCCACCGCCAACGCGCACCAGAAAAAATATTATCAACTGGATATCC
CCGAATGTTTGAAGGTTCTTGATGGGGATGTGTACACAAAATTCCAAGATTATCTCAGCG
CAATGAGCCGTTACGAACTTGAAGCGTCAGGTACCGCACAGGAAGCGTACGCGACCTCTT
TACAGAAGTCCACGATGATATCGAGAGAGTTCAGTACGCGTTGCTTCCTGAACGAGAACC
CTGTCTTCGAATGGGGCCCCAAATACGATTTCGAAGCTTGCGAAGACGACACGTCCGACG
GACAACTTGTCGCAGAGCAAGGCACAGACGGCGACGATAATTCATTAAACCGCGAAGCTA
GAAGGTGGGCCGGTAAATTTGTGAAAGAAAAGAAGCAATTGCAAAGGTTGGAGAGGCTGA
AGCAAAAGTTGGAAGGGTTAAAAAATCGATATACAGAGAATCCTGAAATCGCCAACGAAG
CGAGCATTAACGACGCGACGTTAAAGCTCGAGAAATGTTTGGAAGACACGAGACGGCTGG
AAACGTACAGATTGAAGTCAGAGTCCAAACTTGACGCGTTGCGCAAAGCGCCGGGCATCG
ATGTAGATTCCTGGATACAGAGCGCTCAAAATCAGGTGAGCCACCATCAAAAATATTG

InterProScan

Gene3D	AH/BAR_dom_sf (IPR027267) - T[1-142] 3.2E-16
PANTHER	FCHSD (IPR034936) - T[2-252] 1.1E-57
SUPERFAMILY	AH/BAR_dom_sf (IPR027267) - T[10-131] 3.82E-16

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
FCSD2_HUMAN	39.2 %	171	6.33E-49
FCSD1_HUMAN	28.74 %	101	2.74E-24