- Transcript 'KH2012:KH.C1.481.v1....' >
- Transcript 'Moocci.CG.ELv1_2.S57...' >
- Transcript 'KH2012:KH.C12.696.v1...' >
- Transcript 'Moocul.CG.ELv1_2.S10...' >
- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chrUn.g13371.01.t
Possible name(s)
FZD3; FZD6; SMO
Gene model
Location
chrUn [86,271,669 / 86,276,646]
Amino acid sequence
Length: 551
>Boschl.CG.Botznik2013.chrUn.g13371.01.p
MDGLLQAIPKACLKEADGECVPHNVSDCFGAVLDYTGTSTDLVSDANTLEKAKEKLLLWS
GLRSVPKCWEAIQPLLCALYLPKCENGTIYRPDRTLCQAMKSPCKIVEIEHGWPDFMVCD
NDQVYADKCPTAITSTFNKSQCEKPLMATSNPSSWYEGVDGCGLQCMNPLFNQQEHDDMH
VFIAVCATLTAICTLFAMLSFFIDWKNSSRYPARIIFYINMCFFLCTFGWLAQFFQGSRD
EIICRKDGTVRLGEPVGHDSHESPSCVIIFVFVYYFVMAGVAWFVVLSYSWKVMFQALGK
SQDPLKDKTLHFHLFAWSVAFVLLIASLAVSEIDGDSMSGICFIGYKNHWYRMGFLLVPI
GLMLLVGGYYLCVGLLCLLSLKAGHDGLLSDNAVSKITWTMIRIGLFALCAFVFVLVTFA
SHVYQIVNQPLWDRSFRDFIRCDANITILEKLHPDIEDPAHSKCVVEHRPNIAVMKVKYL
SILYSSRVVTKTQGSESQVNLTFIVLTRVKSSHFNSQPSQVRVQVSEQSAESESWNYDSS
PSHCVDCSVSS
Nucleotide sequence
Length: 1,656
>Boschl.CG.Botznik2013.chrUn.g13371.01.t
TGGATGGGTTATTACAAGCTATACCAAAGGCTTGCTTAAAAGAAGCTGATGGCGAATGCG
TCCCGCACAATGTCAGTGACTGTTTTGGTGCCGTATTGGATTATACTGGAACGTCAACAG
ATTTAGTGTCTGATGCAAATACTTTGGAGAAGGCAAAGGAAAAATTGTTGCTGTGGTCAG
GTTTAAGAAGTGTTCCCAAGTGTTGGGAAGCTATCCAACCGCTGTTATGTGCGCTGTACT
TGCCTAAATGTGAAAATGGAACGATTTACCGCCCAGACAGGACGTTGTGTCAAGCTATGA
AGTCCCCGTGTAAGATTGTGGAAATTGAACATGGTTGGCCTGATTTCATGGTTTGCGATA
ACGATCAAGTGTATGCTGATAAGTGCCCTGCTGCAATTACGAGCACATTCAACAAGTCAC
AGTGTGAAAAGCCATTGATGGCAACGTCGAATCCATCATCGTGGTACGAAGGAGTGGATG
GCTGTGGATTACAATGCATGAATCCGCTCTTCAATCAGCAGGAACACGATGACATGCATG
TTTTCATCGCTGTGTGTGCAACCTTAACTGCAATTTGCACACTTTTCGCGATGGTCTCCT
TCTTTATCGATTGGAAGAACTCCAGCCGATATCCGGCAAGGATTATATTCTACATCAACA
TGTGTTTCTTCCTGTGCACGTTCGGGTGGCTGGCTCAGTTTTTTCAAGGGTCCCGCGACG
AGATCATTTGCCGGAAGGACGGTACCGTCAGGCTGGGAGAACCAGTGGGCCACGATTCTC
ATGAGTCACCTTCGTGCGTGATCATCTTTGTGTTTGTGTACTACTTTGTTATGGCCGGCG
TTGCCTGGTTCGTGGTTCTGTCCTACTCTTGGAAAGTCATGTTTCAAGCGCTCGGAAAAT
CGCAAGACCCCTTGAAGGATAAGGCTCTTCATTTTCATTTGTTTGCATGGTCGGTTGCCT
TTGTTTTGCTTATCGCATCGCTTGCCGTTTCTGAGATTGACGGCGATTCCATGAGCGGTA
TCTGCTTCATAGGATACAAGAATCATTGGTATCGGATGGGGTTTCTGCTGGTACCGATTG
GTCTGATGCTGCTGGTTGGAGGCTACTATCTTTGTGTGGGTCTGCTTTGCTTGCTGAGTT
TGAAGGCCGGGCATGACGGCCTGTTGAGCGATAACGCCGTGTCGAAGATCACGTGGACTA
TGATTAGGATAGGTCTGTTCGCCCTATGCGCGTTCGTCTTTGTCCTCGTTACGTTCGCGT
CGCACGTGTATCAGATCGTGAATCAACCGCTGTGGGACCGTAGCTTCCGCGATTTCATTC
GATGCGACGCCAATATTACCATCCTCGAAAAATTGCATCCTGACATCGAAGATCCCGCTC
ACAGCAAATGTGTCGTCGAACACAGGCCGAATATAGCCGTCATGAAGGTGAAATACCTCA
GTATTCTGGATAGCAGCAGGGTTGTAACCAAGACACAAGGCTCCGAGTCACAAGTCAATC
TCACTTTTATAGTTTTGACTCGAGTCAAGTCGAGTCATTTCAATTCACAACCGAGTCAAG
TCCGAGTCCAAGTCAGCGAGCAGAGTGCCGAGTCCGAGTCATGGAATTATGACTCGAGTC
CAAGTCATTGTGTTGACTGCTCAGTTTCCAGTTGAA
| Gene3D |
Frizzled_dom_sf (IPR036790) - T[6-129] 1.6E-37 |
| ProSiteProfiles |
Frizzled_dom (IPR020067) - T[15-145] 14.693 |
| PANTHER |
Frizzled/SFRP (IPR015526) - T[15-483] 3.8E-215 |
| PANTHER |
SMO (IPR026544) - T[15-483] 3.8E-215 |
| SUPERFAMILY |
Frizzled_dom_sf (IPR036790) - T[19-128] 4.58E-20 |
| SMART |
Frizzled_dom (IPR020067) - T[19-135] 9.9E-19 |
| Pfam |
Frizzled_dom (IPR020067) - T[20-121] 3.1E-11 |
| SMART |
Frizzled/Smoothened_TM (IPR000539) - T[169-495] 3.2E-98 |
| Pfam |
Frizzled/Smoothened_TM (IPR000539) - T[170-485] 1.5E-74 |
| ProSiteProfiles |
GPCR_2-like (IPR017981) - T[179-445] 23.514 |
| PRINTS |
Frizzled/Smoothened_TM (IPR000539) - T[182-204] 5.8E-35 - T[211-233] 5.8E-35 - T[268-292] 5.8E-35 - T[312-335] 5.8E-35 - T[357-379] 5.8E-35 - T[400-421] 5.8E-35 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FZD6_HUMAN | 27.955 % | 164 | 2.98E-43 |
| SMO_HUMAN | 53.376 % | 539 | 0 |
| FZD3_HUMAN | 27.47 % | 148 | 3.4E-38 |