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TRANSCRIPT CARD

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  1. Transcript 'Cisavi.CG.ENS81.R26....' > 
  2. Transcript 'Boschl.CG.Botznik201...'

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chrUn.g13556.01.t

Possible name(s)

AMY1A; AMY1B; AMY1C

Gene model

Boschl.CG.Botznik2013.chrUn.g13556

Location

chrUn [87,497,608 / 87,498,531]

Sequences

Amino acid sequence

Length: 124

>Boschl.CG.Botznik2013.chrUn.g13556.01.p
TGTGGTYFDADSLDFPGVPYGYTDFNTECTGGINYADPWSVRNCWLVGLTDLNQGKDYVR
GKMIDFMNDMINIGVAGFRVDACKHMYPGDLGAIFGGLSDLRSDVFGSGQRAYIFQEVID
QGGI

Nucleotide sequence

Length: 377

>Boschl.CG.Botznik2013.chrUn.g13556.01.t
CACTGGAACCGGGGGTACTTACTTCGACGCCGATTCCTTGGACTTTCCGGGAGTTCCCTA
CGGCTACACAGACTTCAACACAGAATGCACAGGTGGCATCAATTACGCAGATCCGTGGTC
GGTGAGGAATTGCTGGCTTGTCGGCCTGACCGATCTCAACCAAGGAAAGGATTACGTCCG
AGGAAAGATGATCGATTTCATGAATGACATGATCAACATCGGCGTCGCCGGATTCAGAGT
CGACGCTTGCAAGCACATGTACCCGGGAGACTTGGGAGCCATTTTCGGAGGCCTGAGTGA
TCTTAGAAGCGACGTTTTTGGCTCTGGGCAAAGAGCATACATATTCCAAGAAGTCATCGA
CCAAGGAGGTATTTAGT

InterProScan

SUPERFAMILY
Glycoside_hydrolase_SF (IPR017853) - T[3-122] 6.57E-29
Pfam
Glyco_hydro_13_cat_dom (IPR006047) - T[46-88] 2.0E-4
PRINTS
Alpha_amylase (IPR006046) - T[75-86] 4.5E-8 - T[113-124] 4.5E-8

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
AMYP_HUMAN 51.562 % 125 4.4E-35
AMY1_HUMAN 52.344 % 127 9.42E-36
AMY2B_HUMAN 52.344 % 127 1.08E-35