- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chrUn.g13989.01.t
Possible name(s)
PTPRE; PTPRF; PTPRS
Gene model
Location
chrUn [90,179,598 / 90,190,950]
Amino acid sequence
Length: 289
>Boschl.CG.Botznik2013.chrUn.g13989.01.p
MNKQRMNMVQTLEQYETLHQLLVEHHSFGETDVDRRKLFQKYGSEVMKEFDLLRDSEASN
LKIQEHCQGQVNKSLSEPTDEGWATIDATAVEAYQGNLFLIASRGPSVTTVEKFLIALWD
NHVEEVIMLNNPRFEAKSMGINFCEYWPKQPNTTVTYNSISITLQREEKIGNTVERTFLL
HRRNRQDRIIKQSQYLGWRIGEMPAQEDQIIKIMKRIIAFDQEITATILVHCTDGLKRSG
IFIAVLNILARLRSENRIDVFRAVKDLRDIRPGMVPTQVRRVHVSDNFP
Nucleotide sequence
Length: 870
>Boschl.CG.Botznik2013.chrUn.g13989.01.t
TGAATAAACAGCGGATGAATATGGTCCAGACTTTGGAGCAATATGAGACGCTTCATCAAC
TGTTGGTAGAACATCATTCTTTCGGTGAGACCGACGTGGATCGCAGGAAGCTCTTTCAAA
AGTACGGTTCTGAGGTTATGAAGGAGTTCGATCTTCTCAGAGACTCAGAAGCATCGAATT
TGAAAATACAGGAGCATTGTCAAGGTCAAGTAAACAAGTCCTTAAGCGAACCAACTGATG
AAGGATGGGCCACGATCGACGCTACTGCTGTTGAGGCTTACCAAGGGAACCTTTTTCTTA
TCGCATCTCGGGGACCATCAGTTACGACCGTAGAAAAGTTTTTGATAGCTCTGTGGGATA
ATCATGTTGAGGAAGTTATCATGCTCAACAATCCTCGATTTGAAGCGAAGGGTATGGGAA
TTAACTTTTGCGAATACTGGCCTAAACAGCCTAACACGACAGTAACGTACAACAGCATAT
CGATCACACTTCAAAGGGAGGAAAAAATAGGAAACACGGTAGAAAGAACTTTTTTGCTTC
ACAGAAGGAATCGGCAAGATCGAGTTATTAAGCAAAGTCAATACCTTGGTTGGAGAATCG
GAGAGATGCCTGCACAAGAGGATCAGATCATTAAAATAATGAAGCGCATCATTGCTTTTG
ACCAGGAAATTACAGCAACCATATTGGTCCATTGCACGGATGGTTTAAAACGAAGTGGAA
TTTTCATTGCGGTTTTGAACATACTTGCAAGACTTCGGTCGGAGAATAGGATCGATGTCT
TTCGTGCCGTCAAAGATCTCAGAGATATTCGACCCGGAATGGTACCAACACAGGTACGTA
GGGTCCACGTCAGTGATAACTTCCCGTAAA
| SUPERFAMILY |
Prot-tyrosine_phosphatase-like (IPR029021) - T[1-45] 1.22E-5 - T[84-278] 1.9E-39 |
| ProSiteProfiles |
PTPase_domain (IPR000242) - T[11-289] 24.574 |
| Gene3D |
Prot-tyrosine_phosphatase-like (IPR029021) - T[40-284] 2.9E-43 |
| SMART |
PTPase_domain (IPR000242) - T[45-284] 2.1E-8 |
| Pfam |
PTPase_domain (IPR000242) - T[85-277] 7.8E-35 |
| PRINTS |
PTPase_domain (IPR000242) - T[100-120] 7.6E-12 - T[188-205] 7.6E-12 - T[227-245] 7.6E-12 - T[258-273] 7.6E-12 |
| SMART |
Tyr_Pase_cat (IPR003595) - T[189-288] 7.0E-9 |
| ProSiteProfiles |
TYR_PHOSPHATASE_dom (IPR000387) - T[208-282] 16.207 |
| ProSitePatterns |
Tyr_Pase_AS (IPR016130) - T[230-240] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| PTPRF_HUMAN | 29.126 % | 112 | 1.11E-27 |
| PTPRS_HUMAN | 29.126 % | 112 | 7.32E-28 |
| PTPRE_HUMAN | 29.936 % | 110 | 3.63E-27 |